BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

233 related articles for article (PubMed ID: 15531614)

  • 1. An alternative model of amino acid replacement.
    Crooks GE; Brenner SE
    Bioinformatics; 2005 Apr; 21(7):975-80. PubMed ID: 15531614
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Quasi-consensus-based comparison of profile hidden Markov models for protein sequences.
    Kahsay RY; Wang G; Gao G; Liao L; Dunbrack R
    Bioinformatics; 2005 May; 21(10):2287-93. PubMed ID: 15797916
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Designing patterns for profile HMM search.
    Sun Y; Buhler J
    Bioinformatics; 2007 Jan; 23(2):e36-43. PubMed ID: 17237102
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Convergent Island Statistics: a fast method for determining local alignment score significance.
    Poleksic A; Danzer JF; Hambly K; Debe DA
    Bioinformatics; 2005 Jun; 21(12):2827-31. PubMed ID: 15817690
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Application of a simple likelihood ratio approximant to protein sequence classification.
    Kaján L; Kertész-Farkas A; Franklin D; Ivanova N; Kocsor A; Pongor S
    Bioinformatics; 2006 Dec; 22(23):2865-9. PubMed ID: 17090576
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein secondary structure: entropy, correlations and prediction.
    Crooks GE; Brenner SE
    Bioinformatics; 2004 Jul; 20(10):1603-11. PubMed ID: 14988117
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A metric model of amino acid substitution.
    Xu W; Miranker DP
    Bioinformatics; 2004 May; 20(8):1214-21. PubMed ID: 14871874
    [TBL] [Abstract][Full Text] [Related]  

  • 8. An examination of the conservation of surface patch polarity for proteins.
    Shanahan HP; Thornton JM
    Bioinformatics; 2004 Sep; 20(14):2197-204. PubMed ID: 15073014
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities.
    Bastien O; Ortet P; Roy S; Maréchal E
    BMC Bioinformatics; 2005 Mar; 6():49. PubMed ID: 15757521
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Prediction of protein interdomain linker regions by a hidden Markov model.
    Bae K; Mallick BK; Elsik CG
    Bioinformatics; 2005 May; 21(10):2264-70. PubMed ID: 15746283
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Family specific rates of protein evolution.
    Luz H; Vingron M
    Bioinformatics; 2006 May; 22(10):1166-71. PubMed ID: 16510497
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal Ancestor.
    Brooks DJ; Fresco JR; Singh M
    Bioinformatics; 2004 Sep; 20(14):2251-7. PubMed ID: 15073018
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction.
    Scheeff ED; Bourne PE
    BMC Bioinformatics; 2006 Sep; 7():410. PubMed ID: 16970830
    [TBL] [Abstract][Full Text] [Related]  

  • 14. On the relationship between sequence and structure similarities in proteomics.
    Krissinel E
    Bioinformatics; 2007 Mar; 23(6):717-23. PubMed ID: 17242029
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Andante: reducing side-chain rotamer search space during comparative modeling using environment-specific substitution probabilities.
    Smith RE; Lovell SC; Burke DF; Montalvao RW; Blundell TL
    Bioinformatics; 2007 May; 23(9):1099-105. PubMed ID: 17341496
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Use of multiple profiles corresponding to a sequence alignment enables effective detection of remote homologues.
    Anand B; Gowri VS; Srinivasan N
    Bioinformatics; 2005 Jun; 21(12):2821-6. PubMed ID: 15817691
    [TBL] [Abstract][Full Text] [Related]  

  • 17. REVCOM: a robust Bayesian method for evolutionary rate estimation.
    Bordner AJ; Abagyan R
    Bioinformatics; 2005 May; 21(10):2315-21. PubMed ID: 15749694
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes.
    Chou KC
    Bioinformatics; 2005 Jan; 21(1):10-9. PubMed ID: 15308540
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A structure and evolution-guided Monte Carlo sequence selection strategy for multiple alignment-based analysis of proteins.
    Mihalek I; Res I; Lichtarge O
    Bioinformatics; 2006 Jan; 22(2):149-56. PubMed ID: 16303797
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SIMPROT: using an empirically determined indel distribution in simulations of protein evolution.
    Pang A; Smith AD; Nuin PA; Tillier ER
    BMC Bioinformatics; 2005 Sep; 6():236. PubMed ID: 16188037
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.