BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

165 related articles for article (PubMed ID: 15573397)

  • 1. Predicting protein functional sites with phylogenetic motifs.
    La D; Sutch B; Livesay DR
    Proteins; 2005 Feb; 58(2):309-20. PubMed ID: 15573397
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
    La D; Livesay DR
    BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computing motif correlations in proteins.
    Horng JT; Huang HD; Wang SH; Chen MY; Huang SL; Hwang JK
    J Comput Chem; 2003 Dec; 24(16):2032-43. PubMed ID: 14531057
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures.
    Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N
    Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759
    [TBL] [Abstract][Full Text] [Related]  

  • 5. N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence.
    Maurer-Stroh S; Eisenhaber B; Eisenhaber F
    J Mol Biol; 2002 Apr; 317(4):541-57. PubMed ID: 11955008
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MINER: software for phylogenetic motif identification.
    La D; Livesay DR
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W267-70. PubMed ID: 15980467
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evolutionary and structural feedback on selection of sequences for comparative analysis of proteins.
    Mihalek I; Res I; Lichtarge O
    Proteins; 2006 Apr; 63(1):87-99. PubMed ID: 16397893
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Integrating genomic data to predict transcription factor binding.
    Holloway DT; Kon M; DeLisi C
    Genome Inform; 2005; 16(1):83-94. PubMed ID: 16362910
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A method using active-site sequence conservation to find functional shifts in protein families: application to the enzymes of central metabolism, leading to the identification of an anomalous isocitrate dehydrogenase in pathogens.
    Das R; Gerstein M
    Proteins; 2004 May; 55(2):455-63. PubMed ID: 15048835
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Vestige: maximum likelihood phylogenetic footprinting.
    Wakefield MJ; Maxwell P; Huttley GA
    BMC Bioinformatics; 2005 May; 6():130. PubMed ID: 15921531
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CoSMoS: Conserved Sequence Motif Search in the proteome.
    Liu XI; Korde N; Jakob U; Leichert LI
    BMC Bioinformatics; 2006 Jan; 7():37. PubMed ID: 16433915
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparison of ARM and HEAT protein repeats.
    Andrade MA; Petosa C; O'Donoghue SI; Müller CW; Bork P
    J Mol Biol; 2001 May; 309(1):1-18. PubMed ID: 11491282
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Rank information: a structure-independent measure of evolutionary trace quality that improves identification of protein functional sites.
    Yao H; Mihalek I; Lichtarge O
    Proteins; 2006 Oct; 65(1):111-23. PubMed ID: 16894615
    [TBL] [Abstract][Full Text] [Related]  

  • 14. In silico identification of functional regions in proteins.
    Nimrod G; Glaser F; Steinberg D; Ben-Tal N; Pupko T
    Bioinformatics; 2005 Jun; 21 Suppl 1():i328-37. PubMed ID: 15961475
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Improving position-specific predictions of protein functional sites using phylogenetic motifs.
    Dukka BK; Livesay DR
    Bioinformatics; 2008 Oct; 24(20):2308-16. PubMed ID: 18723520
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ConSurf: an algorithmic tool for the identification of functional regions in proteins by surface mapping of phylogenetic information.
    Armon A; Graur D; Ben-Tal N
    J Mol Biol; 2001 Mar; 307(1):447-63. PubMed ID: 11243830
    [TBL] [Abstract][Full Text] [Related]  

  • 17. [Computational method for prediction of protein functional sites using specificity determinants].
    Kalinina OV; Rassel RB; Rakhmaninova AB; Gel'fand MS
    Mol Biol (Mosk); 2007; 41(1):151-62. PubMed ID: 17380902
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Statistical analysis and prediction of protein-protein interfaces.
    Bordner AJ; Abagyan R
    Proteins; 2005 Aug; 60(3):353-66. PubMed ID: 15906321
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Beyond consensus: statistical free energies reveal hidden interactions in the design of a TPR motif.
    Magliery TJ; Regan L
    J Mol Biol; 2004 Oct; 343(3):731-45. PubMed ID: 15465058
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Candidate nsSNPs that can affect the functions and interactions of cell cycle proteins.
    Savas S; Ahmad MF; Shariff M; Kim DY; Ozcelik H
    Proteins; 2005 Feb; 58(3):697-705. PubMed ID: 15617026
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.