These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

115 related articles for article (PubMed ID: 15579121)

  • 1. Correlation between hydrophobicity sequence and accessibility sequence of membrane proteins.
    Xu Q
    Protein Pept Lett; 2004 Dec; 11(6):533-7. PubMed ID: 15579121
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Sequence and conformational preferences at termini of α-helices in membrane proteins: role of the helix environment.
    Shelar A; Bansal M
    Proteins; 2014 Dec; 82(12):3420-36. PubMed ID: 25257385
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The prediction of hydrophobicity gradients within membrane interactive protein alpha-helices using a novel graphical technique.
    Harris F; Dennison S; Phoenix DA
    Protein Pept Lett; 2006; 13(6):595-600. PubMed ID: 16842115
    [TBL] [Abstract][Full Text] [Related]  

  • 4. How important are transmembrane helices of bitopic membrane proteins?
    Zviling M; Kochva U; Arkin IT
    Biochim Biophys Acta; 2007 Mar; 1768(3):387-92. PubMed ID: 17258687
    [TBL] [Abstract][Full Text] [Related]  

  • 5. TOPTMH: topology predictor for transmembrane alpha-helices.
    Ahmed R; Rangwala H; Karypis G
    J Bioinform Comput Biol; 2010 Feb; 8(1):39-57. PubMed ID: 20183873
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Formation of transmembrane helices in vivo--is hydrophobicity all that matters?
    von Heijne G
    J Gen Physiol; 2007 May; 129(5):353-6. PubMed ID: 17438115
    [No Abstract]   [Full Text] [Related]  

  • 7. Sequence context and modified hydrophobic moment plots help identify 'horizontal' surface helices in transmembrane protein structure prediction.
    Orgel JP
    J Struct Biol; 2004 Oct; 148(1):51-65. PubMed ID: 15363787
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Strong correlation between statistical transmembrane tendency and experimental hydrophobicity scales for identification of transmembrane helices.
    Zhao G; London E
    J Membr Biol; 2009 Jun; 229(3):165-8. PubMed ID: 19521654
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Helix perturbations in membrane proteins assist in inter-helical interactions and optimal helix positioning in the bilayer.
    Shelar A; Bansal M
    Biochim Biophys Acta; 2016 Nov; 1858(11):2804-2817. PubMed ID: 27521749
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Membrane proteins: from bench to bits.
    von Heijne G
    Biochem Soc Trans; 2011 Jun; 39(3):747-50. PubMed ID: 21599644
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Marginally hydrophobic transmembrane α-helices shaping membrane protein folding.
    De Marothy MT; Elofsson A
    Protein Sci; 2015 Jul; 24(7):1057-74. PubMed ID: 25970811
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Lipid exposure prediction enhances the inference of rotational angles of transmembrane helices.
    Lai JS; Cheng CW; Lo A; Sung TY; Hsu WL
    BMC Bioinformatics; 2013 Oct; 14():304. PubMed ID: 24112406
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Computational differentiation of N-terminal signal peptides and transmembrane helices.
    Yuan Z; Davis MJ; Zhang F; Teasdale RD
    Biochem Biophys Res Commun; 2003 Dec; 312(4):1278-83. PubMed ID: 14652012
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Why is the biological hydrophobicity scale more accurate than earlier experimental hydrophobicity scales?
    Peters C; Elofsson A
    Proteins; 2014 Sep; 82(9):2190-8. PubMed ID: 24753217
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Hydrophobic organization of alpha-helix membrane bundle in bacteriorhodopsin.
    Efremov RG; Vergoten G
    J Protein Chem; 1996 Jan; 15(1):63-76. PubMed ID: 8838591
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Not all transmembrane helices are born equal: Towards the extension of the sequence homology concept to membrane proteins.
    Wong WC; Maurer-Stroh S; Eisenhaber F
    Biol Direct; 2011 Oct; 6():57. PubMed ID: 22024092
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Large tilts in transmembrane helices can be induced during tertiary structure formation.
    Virkki M; Boekel C; Illergård K; Peters C; Shu N; Tsirigos KD; Elofsson A; von Heijne G; Nilsson I
    J Mol Biol; 2014 Jun; 426(13):2529-38. PubMed ID: 24793448
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The prediction of amphiphilic alpha-helices.
    Phoenix DA; Harris F; Daman OA; Wallace J
    Curr Protein Pept Sci; 2002 Apr; 3(2):201-21. PubMed ID: 12188904
    [TBL] [Abstract][Full Text] [Related]  

  • 19. How strongly do sequence conservation patterns and empirical scales correlate with exposure patterns of transmembrane helices of membrane proteins?
    Park Y; Helms V
    Biopolymers; 2006 Nov; 83(4):389-99. PubMed ID: 16838301
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Hydrophobic pulses predict transmembrane helix irregularities and channel transmembrane units.
    Paulet D; Claustres M; Béroud C
    BMC Bioinformatics; 2011 May; 12():135. PubMed ID: 21545751
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.