135 related articles for article (PubMed ID: 15581354)
1. Recognition of an unnatural difluorophenyl nucleotide by uracil DNA glycosylase.
Jiang YL; McDowell LM; Poliks B; Studelska DR; Cao C; Potter GS; Schaefer J; Song F; Stivers JT
Biochemistry; 2004 Dec; 43(49):15429-38. PubMed ID: 15581354
[TBL] [Abstract][Full Text] [Related]
2. Kinetic mechanism of damage site recognition and uracil flipping by Escherichia coli uracil DNA glycosylase.
Stivers JT; Pankiewicz KW; Watanabe KA
Biochemistry; 1999 Jan; 38(3):952-63. PubMed ID: 9893991
[TBL] [Abstract][Full Text] [Related]
3. The origins of high-affinity enzyme binding to an extrahelical DNA base.
Krosky DJ; Song F; Stivers JT
Biochemistry; 2005 Apr; 44(16):5949-59. PubMed ID: 15835884
[TBL] [Abstract][Full Text] [Related]
4. Mutational analysis of the base-flipping mechanism of uracil DNA glycosylase.
Jiang YL; Stivers JT
Biochemistry; 2002 Sep; 41(37):11236-47. PubMed ID: 12220189
[TBL] [Abstract][Full Text] [Related]
5. Protein mimicry of DNA from crystal structures of the uracil-DNA glycosylase inhibitor protein and its complex with Escherichia coli uracil-DNA glycosylase.
Putnam CD; Shroyer MJ; Lundquist AJ; Mol CD; Arvai AS; Mosbaugh DW; Tainer JA
J Mol Biol; 1999 Mar; 287(2):331-46. PubMed ID: 10080896
[TBL] [Abstract][Full Text] [Related]
6. Base-flipping mutations of uracil DNA glycosylase: substrate rescue using a pyrene nucleotide wedge.
Jiang YL; Stivers JT; Song F
Biochemistry; 2002 Sep; 41(37):11248-54. PubMed ID: 12220190
[TBL] [Abstract][Full Text] [Related]
7. Raman spectroscopy of uracil DNA glycosylase-DNA complexes: insights into DNA damage recognition and catalysis.
Dong J; Drohat AC; Stivers JT; Pankiewicz KW; Carey PR
Biochemistry; 2000 Oct; 39(43):13241-50. PubMed ID: 11052677
[TBL] [Abstract][Full Text] [Related]
8. Heteronuclear NMR and crystallographic studies of wild-type and H187Q Escherichia coli uracil DNA glycosylase: electrophilic catalysis of uracil expulsion by a neutral histidine 187.
Drohat AC; Xiao G; Tordova M; Jagadeesh J; Pankiewicz KW; Watanabe KA; Gilliland GL; Stivers JT
Biochemistry; 1999 Sep; 38(37):11876-86. PubMed ID: 10508390
[TBL] [Abstract][Full Text] [Related]
9. Substitutions at tyrosine 66 of Escherichia coli uracil DNA glycosylase lead to characterization of an efficient enzyme that is recalcitrant to product inhibition.
Acharya N; Talawar RK; Saikrishnan K; Vijayan M; Varshney U
Nucleic Acids Res; 2003 Dec; 31(24):7216-26. PubMed ID: 14654697
[TBL] [Abstract][Full Text] [Related]
10. Selective recognition of uracil and its derivatives using a DNA repair enzyme structural mimic.
Jiang YL; Gao X; Zhou G; Patel A; Javer A
J Org Chem; 2010 Jan; 75(2):324-33. PubMed ID: 20017469
[TBL] [Abstract][Full Text] [Related]
11. Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited.
Xiao G; Tordova M; Jagadeesh J; Drohat AC; Stivers JT; Gilliland GL
Proteins; 1999 Apr; 35(1):13-24. PubMed ID: 10090282
[TBL] [Abstract][Full Text] [Related]
12. Role of electrophilic and general base catalysis in the mechanism of Escherichia coli uracil DNA glycosylase.
Drohat AC; Jagadeesh J; Ferguson E; Stivers JT
Biochemistry; 1999 Sep; 38(37):11866-75. PubMed ID: 10508389
[TBL] [Abstract][Full Text] [Related]
13. Contribution of a conserved phenylalanine residue to the activity of Escherichia coli uracil DNA glycosylase.
Shaw RW; Feller JA; Bloom LB
DNA Repair (Amst); 2004 Oct; 3(10):1273-83. PubMed ID: 15336623
[TBL] [Abstract][Full Text] [Related]
14. Linear free energy correlations for enzymatic base flipping: how do damaged base pairs facilitate specific recognition?
Krosky DJ; Schwarz FP; Stivers JT
Biochemistry; 2004 Apr; 43(14):4188-95. PubMed ID: 15065862
[TBL] [Abstract][Full Text] [Related]
15. Crystal structure of a family 4 uracil-DNA glycosylase from Thermus thermophilus HB8.
Hoseki J; Okamoto A; Masui R; Shibata T; Inoue Y; Yokoyama S; Kuramitsu S
J Mol Biol; 2003 Oct; 333(3):515-26. PubMed ID: 14556741
[TBL] [Abstract][Full Text] [Related]
16. Escherichia coli uracil DNA glycosylase: NMR characterization of the short hydrogen bond from His187 to uracil O2.
Drohat AC; Stivers JT
Biochemistry; 2000 Oct; 39(39):11865-75. PubMed ID: 11009598
[TBL] [Abstract][Full Text] [Related]
17. Dynamic opening of DNA during the enzymatic search for a damaged base.
Cao C; Jiang YL; Stivers JT; Song F
Nat Struct Mol Biol; 2004 Dec; 11(12):1230-6. PubMed ID: 15558051
[TBL] [Abstract][Full Text] [Related]
18. Specificity and catalysis of uracil DNA glycosylase. A molecular dynamics study of reactant and product complexes with DNA.
Luo N; Mehler E; Osman R
Biochemistry; 1999 Jul; 38(29):9209-20. PubMed ID: 10413495
[TBL] [Abstract][Full Text] [Related]
19. Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis.
Mol CD; Arvai AS; Slupphaug G; Kavli B; Alseth I; Krokan HE; Tainer JA
Cell; 1995 Mar; 80(6):869-78. PubMed ID: 7697717
[TBL] [Abstract][Full Text] [Related]
20. A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA.
Slupphaug G; Mol CD; Kavli B; Arvai AS; Krokan HE; Tainer JA
Nature; 1996 Nov; 384(6604):87-92. PubMed ID: 8900285
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]