163 related articles for article (PubMed ID: 15598820)
1. Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data.
Le K; Mitsouras K; Roy M; Wang Q; Xu Q; Nelson SF; Lee C
Nucleic Acids Res; 2004 Dec; 32(22):e180. PubMed ID: 15598820
[TBL] [Abstract][Full Text] [Related]
2. Discovery of tissue-specific exons using comprehensive human exon microarrays.
Clark TA; Schweitzer AC; Chen TX; Staples MK; Lu G; Wang H; Williams A; Blume JE
Genome Biol; 2007; 8(4):R64. PubMed ID: 17456239
[TBL] [Abstract][Full Text] [Related]
3. A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.
Yoshida R; Numata K; Imoto S; Nagasaki M; Doi A; Ueno K; Miyano S
Genome Inform; 2006; 17(1):88-99. PubMed ID: 17503359
[TBL] [Abstract][Full Text] [Related]
4. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
Bemmo A; Benovoy D; Kwan T; Gaffney DJ; Jensen RV; Majewski J
BMC Genomics; 2008 Nov; 9():529. PubMed ID: 18990248
[TBL] [Abstract][Full Text] [Related]
5. A robust estimation of exon expression to identify alternative spliced genes applied to human tissues and cancer samples.
RisueƱo A; Roson-Burgo B; Dolnik A; Hernandez-Rivas JM; Bullinger L; De Las Rivas J
BMC Genomics; 2014 Oct; 15(1):879. PubMed ID: 25297679
[TBL] [Abstract][Full Text] [Related]
6. Exon-based clustering of murine breast tumor transcriptomes reveals alternative exons whose expression is associated with metastasis.
Dutertre M; Lacroix-Triki M; Driouch K; de la Grange P; Gratadou L; Beck S; Millevoi S; Tazi J; Lidereau R; Vagner S; Auboeuf D
Cancer Res; 2010 Feb; 70(3):896-905. PubMed ID: 20103641
[TBL] [Abstract][Full Text] [Related]
7. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
Gardina PJ; Clark TA; Shimada B; Staples MK; Yang Q; Veitch J; Schweitzer A; Awad T; Sugnet C; Dee S; Davies C; Williams A; Turpaz Y
BMC Genomics; 2006 Dec; 7():325. PubMed ID: 17192196
[TBL] [Abstract][Full Text] [Related]
8. Inferring global levels of alternative splicing isoforms using a generative model of microarray data.
Shai O; Morris QD; Blencowe BJ; Frey BJ
Bioinformatics; 2006 Mar; 22(5):606-13. PubMed ID: 16403798
[TBL] [Abstract][Full Text] [Related]
9. Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.
Wang Y; Barbacioru C; Hyland F; Xiao W; Hunkapiller KL; Blake J; Chan F; Gonzalez C; Zhang L; Samaha RR
BMC Genomics; 2006 Mar; 7():59. PubMed ID: 16551369
[TBL] [Abstract][Full Text] [Related]
10. Bioinformatics analysis of alternative splicing.
Lee C; Wang Q
Brief Bioinform; 2005 Mar; 6(1):23-33. PubMed ID: 15826354
[TBL] [Abstract][Full Text] [Related]
11. Functional coordination of alternative splicing in the mammalian central nervous system.
Fagnani M; Barash Y; Ip JY; Misquitta C; Pan Q; Saltzman AL; Shai O; Lee L; Rozenhek A; Mohammad N; Willaime-Morawek S; Babak T; Zhang W; Hughes TR; van der Kooy D; Frey BJ; Blencowe BJ
Genome Biol; 2007; 8(6):R108. PubMed ID: 17565696
[TBL] [Abstract][Full Text] [Related]
12. Predicting splice variant from DNA chip expression data.
Hu GK; Madore SJ; Moldover B; Jatkoe T; Balaban D; Thomas J; Wang Y
Genome Res; 2001 Jul; 11(7):1237-45. PubMed ID: 11435406
[TBL] [Abstract][Full Text] [Related]
13. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
Ha KCh; Coulombe-Huntington J; Majewski J
BMC Genomics; 2009 Nov; 10():519. PubMed ID: 19909511
[TBL] [Abstract][Full Text] [Related]
14. Unusual intron conservation near tissue-regulated exons found by splicing microarrays.
Sugnet CW; Srinivasan K; Clark TA; O'Brien G; Cline MS; Wang H; Williams A; Kulp D; Blume JE; Haussler D; Ares M
PLoS Comput Biol; 2006 Jan; 2(1):e4. PubMed ID: 16424921
[TBL] [Abstract][Full Text] [Related]
15. Profiling alternative splicing on fiber-optic arrays.
Yeakley JM; Fan JB; Doucet D; Luo L; Wickham E; Ye Z; Chee MS; Fu XD
Nat Biotechnol; 2002 Apr; 20(4):353-8. PubMed ID: 11923840
[TBL] [Abstract][Full Text] [Related]
16. Bioinformatics detection of alternative splicing.
Kim N; Lee C
Methods Mol Biol; 2008; 452():179-97. PubMed ID: 18566765
[TBL] [Abstract][Full Text] [Related]
17. High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity.
Zhou W; Calciano MA; Jordan H; Brenner M; Johnson S; Wu D; Lei L; Pallares D; Beurdeley P; Rouet F; Gill PS; Bracco L; Soucaille C; Einstein R
BMC Genet; 2009 Oct; 10():63. PubMed ID: 19804644
[TBL] [Abstract][Full Text] [Related]
18. MADS+: discovery of differential splicing events from Affymetrix exon junction array data.
Shen S; Warzecha CC; Carstens RP; Xing Y
Bioinformatics; 2010 Jan; 26(2):268-9. PubMed ID: 19933160
[TBL] [Abstract][Full Text] [Related]
19. Alternative promoter usage and alternative splicing contribute to mRNA heterogeneity of mouse monocarboxylate transporter 2.
Zhang SX; Searcy TR; Wu Y; Gozal D; Wang Y
Physiol Genomics; 2007 Dec; 32(1):95-104. PubMed ID: 17911380
[TBL] [Abstract][Full Text] [Related]
20. Heritability of alternative splicing in the human genome.
Kwan T; Benovoy D; Dias C; Gurd S; Serre D; Zuzan H; Clark TA; Schweitzer A; Staples MK; Wang H; Blume JE; Hudson TJ; Sladek R; Majewski J
Genome Res; 2007 Aug; 17(8):1210-8. PubMed ID: 17671095
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]