BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

878 related articles for article (PubMed ID: 15608232)

  • 1. STRING: known and predicted protein-protein associations, integrated and transferred across organisms.
    von Mering C; Jensen LJ; Snel B; Hooper SD; Krupp M; Foglierini M; Jouffre N; Huynen MA; Bork P
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D433-7. PubMed ID: 15608232
    [TBL] [Abstract][Full Text] [Related]  

  • 2. STRING 7--recent developments in the integration and prediction of protein interactions.
    von Mering C; Jensen LJ; Kuhn M; Chaffron S; Doerks T; Krüger B; Snel B; Bork P
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D358-62. PubMed ID: 17098935
    [TBL] [Abstract][Full Text] [Related]  

  • 3. STRING 8--a global view on proteins and their functional interactions in 630 organisms.
    Jensen LJ; Kuhn M; Stark M; Chaffron S; Creevey C; Muller J; Doerks T; Julien P; Roth A; Simonovic M; Bork P; von Mering C
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D412-6. PubMed ID: 18940858
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Databases of protein-protein interactions and complexes.
    Ooi HS; Schneider G; Chan YL; Lim TT; Eisenhaber B; Eisenhaber F
    Methods Mol Biol; 2010; 609():145-59. PubMed ID: 20221918
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Searching for hypothetical proteins: theory and practice based upon original data and literature.
    Lubec G; Afjehi-Sadat L; Yang JW; John JP
    Prog Neurobiol; 2005; 77(1-2):90-127. PubMed ID: 16271823
    [TBL] [Abstract][Full Text] [Related]  

  • 6. AVID: an integrative framework for discovering functional relationships among proteins.
    Jiang T; Keating AE
    BMC Bioinformatics; 2005 Jun; 6():136. PubMed ID: 15929793
    [TBL] [Abstract][Full Text] [Related]  

  • 7. STRING v10: protein-protein interaction networks, integrated over the tree of life.
    Szklarczyk D; Franceschini A; Wyder S; Forslund K; Heller D; Huerta-Cepas J; Simonovic M; Roth A; Santos A; Tsafou KP; Kuhn M; Bork P; Jensen LJ; von Mering C
    Nucleic Acids Res; 2015 Jan; 43(Database issue):D447-52. PubMed ID: 25352553
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.
    Teyra J; Doms A; Schroeder M; Pisabarro MT
    BMC Bioinformatics; 2006 Mar; 7():104. PubMed ID: 16512892
    [TBL] [Abstract][Full Text] [Related]  

  • 9. PFP: Automated prediction of gene ontology functional annotations with confidence scores using protein sequence data.
    Hawkins T; Chitale M; Luban S; Kihara D
    Proteins; 2009 Feb; 74(3):566-82. PubMed ID: 18655063
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale.
    Li H; Li J; Wong L
    Bioinformatics; 2006 Apr; 22(8):989-96. PubMed ID: 16446278
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PROMPT: a protein mapping and comparison tool.
    Schmidt T; Frishman D
    BMC Bioinformatics; 2006 Jul; 7():331. PubMed ID: 16817977
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Graph sharpening plus graph integration: a synergy that improves protein functional classification.
    Shin H; Lisewski AM; Lichtarge O
    Bioinformatics; 2007 Dec; 23(23):3217-24. PubMed ID: 17977886
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MINT: the Molecular INTeraction database.
    Chatr-aryamontri A; Ceol A; Palazzi LM; Nardelli G; Schneider MV; Castagnoli L; Cesareni G
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D572-4. PubMed ID: 17135203
    [TBL] [Abstract][Full Text] [Related]  

  • 14. DAPID: a 3D-domain annotated protein-protein interaction database.
    Chen YC; Chen HC; Yang JM
    Genome Inform; 2006; 17(2):206-15. PubMed ID: 17503393
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Domain-based small molecule binding site annotation.
    Snyder KA; Feldman HJ; Dumontier M; Salama JJ; Hogue CW
    BMC Bioinformatics; 2006 Mar; 7():152. PubMed ID: 16545112
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessible.
    Szklarczyk D; Morris JH; Cook H; Kuhn M; Wyder S; Simonovic M; Santos A; Doncheva NT; Roth A; Bork P; Jensen LJ; von Mering C
    Nucleic Acids Res; 2017 Jan; 45(D1):D362-D368. PubMed ID: 27924014
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MIPS: analysis and annotation of genome information in 2007.
    Mewes HW; Dietmann S; Frishman D; Gregory R; Mannhaupt G; Mayer KF; Münsterkötter M; Ruepp A; Spannagl M; Stümpflen V; Rattei T
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D196-201. PubMed ID: 18158298
    [TBL] [Abstract][Full Text] [Related]  

  • 18. STRING v9.1: protein-protein interaction networks, with increased coverage and integration.
    Franceschini A; Szklarczyk D; Frankild S; Kuhn M; Simonovic M; Roth A; Lin J; Minguez P; Bork P; von Mering C; Jensen LJ
    Nucleic Acids Res; 2013 Jan; 41(Database issue):D808-15. PubMed ID: 23203871
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Integrated analysis of multiple data sources reveals modular structure of biological networks.
    Lu H; Shi B; Wu G; Zhang Y; Zhu X; Zhang Z; Liu C; Zhao Y; Wu T; Wang J; Chen R
    Biochem Biophys Res Commun; 2006 Jun; 345(1):302-9. PubMed ID: 16690033
    [TBL] [Abstract][Full Text] [Related]  

  • 20. ConsensusPathDB--a database for integrating human functional interaction networks.
    Kamburov A; Wierling C; Lehrach H; Herwig R
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D623-8. PubMed ID: 18940869
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 44.