These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
144 related articles for article (PubMed ID: 15625108)
21. Stochastic off-lattice modeling of molecular self-assembly in crowded environments by Green's function reaction dynamics. Lee B; Leduc PR; Schwartz R Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Sep; 78(3 Pt 1):031911. PubMed ID: 18851069 [TBL] [Abstract][Full Text] [Related]
22. Transmembrane Helix Assembly by Max-Min Ant System Algorithm. Sujaree K; Kitjaruwankul S; Boonamnaj P; Supunyabut C; Sompornpisut P Chem Biol Drug Des; 2015 Dec; 86(6):1360-72. PubMed ID: 26058409 [TBL] [Abstract][Full Text] [Related]
23. Fast and robust extraction of optical and morphological properties of human skin using a hybrid stochastic-deterministic algorithm: Monte-Carlo simulation study. Choi SH Lasers Med Sci; 2010 Sep; 25(5):733-41. PubMed ID: 20549282 [TBL] [Abstract][Full Text] [Related]
25. Stochastic simulation algorithms for Interacting Particle Systems. Stutz TC; Landeros A; Xu J; Sinsheimer JS; Sehl M; Lange K PLoS One; 2021; 16(3):e0247046. PubMed ID: 33651796 [TBL] [Abstract][Full Text] [Related]
26. A comparison of deterministic and stochastic simulations of neuronal vesicle release models. Modchang C; Nadkarni S; Bartol TM; Triampo W; Sejnowski TJ; Levine H; Rappel WJ Phys Biol; 2010 May; 7(2):026008. PubMed ID: 20505227 [TBL] [Abstract][Full Text] [Related]
27. Refining the weighted stochastic simulation algorithm. Gillespie DT; Roh M; Petzold LR J Chem Phys; 2009 May; 130(17):174103. PubMed ID: 19425765 [TBL] [Abstract][Full Text] [Related]
28. Simulation Strategies for Calcium Microdomains and Calcium Noise. Wieder N; Fink RHA; von Wegner F Adv Exp Med Biol; 2020; 1131():771-797. PubMed ID: 31646534 [TBL] [Abstract][Full Text] [Related]
30. Generalizing Gillespie's Direct Method to Enable Network-Free Simulations. Suderman R; Mitra ED; Lin YT; Erickson KE; Feng S; Hlavacek WS Bull Math Biol; 2019 Aug; 81(8):2822-2848. PubMed ID: 29594824 [TBL] [Abstract][Full Text] [Related]
31. In-silico analysis on biofabricating vascular networks using kinetic Monte Carlo simulations. Sun Y; Yang X; Wang Q Biofabrication; 2014 Mar; 6(1):015008. PubMed ID: 24429898 [TBL] [Abstract][Full Text] [Related]
32. STOCKS: STOChastic Kinetic Simulations of biochemical systems with Gillespie algorithm. Kierzek AM Bioinformatics; 2002 Mar; 18(3):470-81. PubMed ID: 11934747 [TBL] [Abstract][Full Text] [Related]
33. Unified representation of Life's basic properties by a 3-species Stochastic Cubic Autocatalytic Reaction-Diffusion system of equations. Muñuzuri AP; Pérez-Mercader J Phys Life Rev; 2022 Jul; 41():64-83. PubMed ID: 35594602 [TBL] [Abstract][Full Text] [Related]
34. MONALISA for stochastic simulations of Petri net models of biochemical systems. Balazki P; Lindauer K; Einloft J; Ackermann J; Koch I BMC Bioinformatics; 2015 Jul; 16():215. PubMed ID: 26156221 [TBL] [Abstract][Full Text] [Related]
39. Extending rule-based methods to model molecular geometry and 3D model resolution. Hoard B; Jacobson B; Manavi K; Tapia L BMC Syst Biol; 2016 Aug; 10 Suppl 2(Suppl 2):48. PubMed ID: 27490268 [TBL] [Abstract][Full Text] [Related]
40. Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle. Liu Z; Pu Y; Li F; Shaffer CA; Hoops S; Tyson JJ; Cao Y J Chem Phys; 2012 Jan; 136(3):034105. PubMed ID: 22280742 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]