209 related articles for article (PubMed ID: 15628872)
1. Antisense recognition of the HER-2 mRNA: effects of phosphorothioate substitution and polyamines on DNA.RNA, RNA.RNA, and DNA.DNA duplex stability.
Venkiteswaran S; Vijayanathan V; Shirahata A; Thomas T; Thomas TJ
Biochemistry; 2005 Jan; 44(1):303-12. PubMed ID: 15628872
[TBL] [Abstract][Full Text] [Related]
2. Selectivity of polyamines on the stability of RNA-DNA hybrids containing phosphodiester and phosphorothioate oligodeoxyribonucleotides.
Antony T; Thomas T; Shirahata A; Thomas TJ
Biochemistry; 1999 Aug; 38(33):10775-84. PubMed ID: 10451373
[TBL] [Abstract][Full Text] [Related]
3. Efficient stabilization of phosphodiester (PO), phosphorothioate (PS), and 2'-O-methoxy (2'-OMe) DNA·RNA hybrid duplexes by amino sugars.
Charles I; Davis E; Arya DP
Biochemistry; 2012 Jul; 51(27):5496-505. PubMed ID: 22639785
[TBL] [Abstract][Full Text] [Related]
4. Hybrid oligomer duplexes formed with phosphorothioate DNAs: CD spectra and melting temperatures of S-DNA.RNA hybrids are sequence-dependent but consistent with similar heteronomous conformations.
Hashem GM; Pham L; Vaughan MR; Gray DM
Biochemistry; 1998 Jan; 37(1):61-72. PubMed ID: 9425026
[TBL] [Abstract][Full Text] [Related]
5. Effects of chain length modification and bis(ethyl) substitution of spermine analogs on purine-purine-pyrimidine triplex DNA stabilization, aggregation, and conformational transitions.
Musso M; Thomas T; Shirahata A; Sigal LH; Van Dyke MW; Thomas TJ
Biochemistry; 1997 Feb; 36(6):1441-9. PubMed ID: 9063892
[TBL] [Abstract][Full Text] [Related]
6. Conformation of formacetal and 3'-thioformacetal nucleotide linkers and stability of their antisense RNA.DNA hybrid duplexes.
Rice JS; Gao X
Biochemistry; 1997 Jan; 36(2):399-411. PubMed ID: 9003193
[TBL] [Abstract][Full Text] [Related]
7. DNA triple helix stabilization by bisguanidinyl analogues of biogenic polyamines.
Pallan PS; Ganesh KN
Biochem Biophys Res Commun; 1996 May; 222(2):416-20. PubMed ID: 8670220
[TBL] [Abstract][Full Text] [Related]
8. Analogues of a locked nucleic acid with three-carbon 2',4'-linkages: synthesis by ring-closing metathesis and influence on nucleic acid duplex stability and structure.
Albaek N; Petersen M; Nielsen P
J Org Chem; 2006 Sep; 71(20):7731-40. PubMed ID: 16995680
[TBL] [Abstract][Full Text] [Related]
9. Comparison of the thermodynamic stabilities and solution conformations of DNA.RNA hybrids containing purine-rich and pyrimidine-rich strands with DNA and RNA duplexes.
Gyi JI; Conn GL; Lane AN; Brown T
Biochemistry; 1996 Sep; 35(38):12538-48. PubMed ID: 8823191
[TBL] [Abstract][Full Text] [Related]
10. Ionic and structural specificity effects of natural and synthetic polyamines on the aggregation and resolubilization of single-, double-, and triple-stranded DNA.
Saminathan M; Antony T; Shirahata A; Sigal LH; Thomas T; Thomas TJ
Biochemistry; 1999 Mar; 38(12):3821-30. PubMed ID: 10090772
[TBL] [Abstract][Full Text] [Related]
11. Influences of ribonucleotide on a duplex conformation and its thermal stability: study with the chimeric RNA-DNA strands.
Nakano S; Kanzaki T; Sugimoto N
J Am Chem Soc; 2004 Feb; 126(4):1088-95. PubMed ID: 14746477
[TBL] [Abstract][Full Text] [Related]
12. Phosphorothioate-phosphodiester oligonucleotide co-polymers: assessment for antisense application.
Ghosh MK; Ghosh K; Cohen JS
Anticancer Drug Des; 1993 Feb; 8(1):15-32. PubMed ID: 8386513
[TBL] [Abstract][Full Text] [Related]
13. Solution structure of the duplexes between phosphorothioate DNA and target DNA/RNA.
Kanehara H; Nishi M; Makino K
Nucleic Acids Symp Ser; 1995; (34):53-4. PubMed ID: 8841548
[TBL] [Abstract][Full Text] [Related]
14. Double sugar and phosphate backbone-constrained nucleotides: synthesis, structure, stability, and their incorporation into oligodeoxynucleotides.
Zhou C; Plashkevych O; Chattopadhyaya J
J Org Chem; 2009 May; 74(9):3248-65. PubMed ID: 19348480
[TBL] [Abstract][Full Text] [Related]
15. Effects of aminooxy analogues of biogenic polyamines on aggregation and stability of calf thymus DNA.
Ramírez FJ; Thomas TJ; Antony T; Ruiz-Chica J; Thomas T
Biopolymers; 2002 Oct; 65(2):148-57. PubMed ID: 12209465
[TBL] [Abstract][Full Text] [Related]
16. Effect of phosphorothioate chirality on i-motif structure and stability.
Kanaori K; Sakamoto S; Yoshida H; Guga P; Stec W; Tajima K; Makino K
Biochemistry; 2004 May; 43(19):5672-9. PubMed ID: 15134441
[TBL] [Abstract][Full Text] [Related]
17. Pyrimidine-purine-pyrimidine triplex DNA stabilization in the presence of tetramine and pentamine analogues of spermine.
Thomas TJ; Ashley C; Thomas T; Shirahata A; Sigal LH; Lee JS
Biochem Cell Biol; 1997; 75(3):207-15. PubMed ID: 9404640
[TBL] [Abstract][Full Text] [Related]
18. Influence of cationic molecules on the hairpin to duplex equilibria of self-complementary DNA and RNA oligonucleotides.
Nakano S; Kirihata T; Fujii S; Sakai H; Kuwahara M; Sawai H; Sugimoto N
Nucleic Acids Res; 2007; 35(2):486-94. PubMed ID: 17169988
[TBL] [Abstract][Full Text] [Related]
19. Comparison of the thermodynamics and base-pair dynamics of a full LNA:DNA duplex and of the isosequential DNA:DNA duplex.
Bruylants G; Boccongelli M; Snoussi K; Bartik K
Biochemistry; 2009 Sep; 48(35):8473-82. PubMed ID: 19670874
[TBL] [Abstract][Full Text] [Related]
20. Structural effect of complete [Rp]-phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex.
Furrer P; Billeci TM; Donati A; Kojima C; Karwowski B; Sierzchala A; Stec W; James TL
J Mol Biol; 1999 Jan; 285(4):1609-22. PubMed ID: 9917400
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]