These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

154 related articles for article (PubMed ID: 15638577)

  • 21. An adaptive multi-level simulation algorithm for stochastic biological systems.
    Lester C; Yates CA; Giles MB; Baker RE
    J Chem Phys; 2015 Jan; 142(2):024113. PubMed ID: 25591344
    [TBL] [Abstract][Full Text] [Related]  

  • 22. An equation-free probabilistic steady-state approximation: dynamic application to the stochastic simulation of biochemical reaction networks.
    Salis H; Kaznessis YN
    J Chem Phys; 2005 Dec; 123(21):214106. PubMed ID: 16356038
    [TBL] [Abstract][Full Text] [Related]  

  • 23. "All possible steps" approach to the accelerated use of Gillespie's algorithm.
    Lipshtat A
    J Chem Phys; 2007 May; 126(18):184103. PubMed ID: 17508788
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Dynamic partitioning for hybrid simulation of the bistable HIV-1 transactivation network.
    Griffith M; Courtney T; Peccoud J; Sanders WH
    Bioinformatics; 2006 Nov; 22(22):2782-9. PubMed ID: 16954141
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Topological coarse graining of polymer chains using wavelet-accelerated Monte Carlo. I. Freely jointed chains.
    Ismail AE; Rutledge GC; Stephanopoulos G
    J Chem Phys; 2005 Jun; 122(23):234901. PubMed ID: 16008481
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Accurate implementation of leaping in space: the spatial partitioned-leaping algorithm.
    Iyengar KA; Harris LA; Clancy P
    J Chem Phys; 2010 Mar; 132(9):094101. PubMed ID: 20210383
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Exact stochastic simulation of coupled chemical reactions with delays.
    Cai X
    J Chem Phys; 2007 Mar; 126(12):124108. PubMed ID: 17411109
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Stochastic potential switching algorithm for Monte Carlo simulations of complex systems.
    Mak CH
    J Chem Phys; 2005 Jun; 122(21):214110. PubMed ID: 15974731
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Path ensembles and path sampling in nonequilibrium stochastic systems.
    Harland B; Sun SX
    J Chem Phys; 2007 Sep; 127(10):104103. PubMed ID: 17867733
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Solving the problem of negative populations in approximate accelerated stochastic simulations using the representative reaction approach.
    Kadam S; Vanka K
    J Comput Chem; 2013 Feb; 34(5):394-404. PubMed ID: 23079736
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Simulation methods with extended stability for stiff biochemical Kinetics.
    Rué P; Villà-Freixa J; Burrage K
    BMC Syst Biol; 2010 Aug; 4():110. PubMed ID: 20701766
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Incorporating postleap checks in tau-leaping.
    Anderson DF
    J Chem Phys; 2008 Feb; 128(5):054103. PubMed ID: 18266441
    [TBL] [Abstract][Full Text] [Related]  

  • 33. On speeding up stochastic simulations by parallelization of random number generation.
    Shu CC; Tran V; Binagia J; Ramkrishna D
    Chem Eng Sci; 2015 Dec; 137():828-836. PubMed ID: 26365997
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The finite state projection algorithm for the solution of the chemical master equation.
    Munsky B; Khammash M
    J Chem Phys; 2006 Jan; 124(4):044104. PubMed ID: 16460146
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Statistical motor number estimation assuming a binomial distribution.
    Blok JH; Visser GH; de Graaf S; Zwarts MJ; Stegeman DF
    Muscle Nerve; 2005 Feb; 31(2):182-91. PubMed ID: 15736298
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Modeling real dynamics in the coarse-grained representation of condensed phase systems.
    Izvekov S; Voth GA
    J Chem Phys; 2006 Oct; 125(15):151101. PubMed ID: 17059230
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Nested stochastic simulation algorithm for chemical kinetic systems with disparate rates.
    E W; Liu D; Vanden-Eijnden E
    J Chem Phys; 2005 Nov; 123(19):194107. PubMed ID: 16321076
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Monte Carlo free energy calculations using electronic structure methods.
    Matusek DR; Osborne S; St-Amant A
    J Chem Phys; 2008 Apr; 128(15):154110. PubMed ID: 18433193
    [TBL] [Abstract][Full Text] [Related]  

  • 39. The multiscale coarse-graining method. III. A test of pairwise additivity of the coarse-grained potential and of new basis functions for the variational calculation.
    Das A; Andersen HC
    J Chem Phys; 2009 Jul; 131(3):034102. PubMed ID: 19624176
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Asynchronous τ-leaping.
    Jȩdrzejewski-Szmek Z; Blackwell KT
    J Chem Phys; 2016 Mar; 144(12):125104. PubMed ID: 27036481
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.