BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 15640451)

  • 1. MAP2: multiple alignment of syntenic genomic sequences.
    Ye L; Huang X
    Nucleic Acids Res; 2005; 33(1):162-70. PubMed ID: 15640451
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A generalized global alignment algorithm.
    Huang X; Chao KM
    Bioinformatics; 2003 Jan; 19(2):228-33. PubMed ID: 12538243
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Efficient combination of multiple word models for improved sequence comparison.
    Huang X; Ye L; Chou HH; Yang IH; Chao KM
    Bioinformatics; 2004 Nov; 20(16):2529-33. PubMed ID: 15117751
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MAVID multiple alignment server.
    Bray N; Pachter L
    Nucleic Acids Res; 2003 Jul; 31(13):3525-6. PubMed ID: 12824358
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A min-cut algorithm for the consistency problem in multiple sequence alignment.
    Corel E; Pitschi F; Morgenstern B
    Bioinformatics; 2010 Apr; 26(8):1015-21. PubMed ID: 20189940
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.
    Brendel V; Xing L; Zhu W
    Bioinformatics; 2004 May; 20(7):1157-69. PubMed ID: 14764557
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fast and sensitive alignment of large genomic sequences.
    Brudno M; Morgenstern B
    Proc IEEE Comput Soc Bioinform Conf; 2002; 1():138-47. PubMed ID: 15838131
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Glocal alignment: finding rearrangements during alignment.
    Brudno M; Malde S; Poliakov A; Do CB; Couronne O; Dubchak I; Batzoglou S
    Bioinformatics; 2003; 19 Suppl 1():i54-62. PubMed ID: 12855437
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MultiPipMaker: comparative alignment server for multiple DNA sequences.
    Elnitski L; Riemer C; Burhans R; Hardison R; Miller W
    Curr Protoc Bioinformatics; 2005 Apr; Chapter 10():Unit10.4. PubMed ID: 18428743
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R
    BMC Bioinformatics; 2006 Mar; 7():143. PubMed ID: 16542424
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences.
    Schwartz S; Elnitski L; Li M; Weirauch M; Riemer C; Smit A; ; Green ED; Hardison RC; Miller W
    Nucleic Acids Res; 2003 Jul; 31(13):3518-24. PubMed ID: 12824357
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DIALIGN: finding local similarities by multiple sequence alignment.
    Morgenstern B; Frech K; Dress A; Werner T
    Bioinformatics; 1998; 14(3):290-4. PubMed ID: 9614273
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SLAM web server for comparative gene finding and alignment.
    Cawley S; Pachter L; Alexandersson M
    Nucleic Acids Res; 2003 Jul; 31(13):3507-9. PubMed ID: 12824355
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Accurate anchoring alignment of divergent sequences.
    Huang W; Umbach DM; Li L
    Bioinformatics; 2006 Jan; 22(1):29-34. PubMed ID: 16301203
    [TBL] [Abstract][Full Text] [Related]  

  • 15. CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomes.
    Uchiyama I; Higuchi T; Kobayashi I
    BMC Bioinformatics; 2006 Oct; 7():472. PubMed ID: 17062155
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SynBrowse: a synteny browser for comparative sequence analysis.
    Pan X; Stein L; Brendel V
    Bioinformatics; 2005 Sep; 21(17):3461-8. PubMed ID: 15994196
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genomic multiple sequence alignments: refinement using a genetic algorithm.
    Wang C; Lefkowitz EJ
    BMC Bioinformatics; 2005 Aug; 6():200. PubMed ID: 16086841
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Pattern locator: a new tool for finding local sequence patterns in genomic DNA sequences.
    Mrázek J; Xie S
    Bioinformatics; 2006 Dec; 22(24):3099-100. PubMed ID: 17095514
    [TBL] [Abstract][Full Text] [Related]  

  • 19. PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny.
    Siddharthan R; Siggia ED; van Nimwegen E
    PLoS Comput Biol; 2005 Dec; 1(7):e67. PubMed ID: 16477324
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Multiple alignment of genomic sequences using CHAOS, DIALIGN and ABC.
    Pöhler D; Werner N; Steinkamp R; Morgenstern B
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W532-4. PubMed ID: 15980528
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.