266 related articles for article (PubMed ID: 15644213)
1. Identification of single Mn(2+) binding sites required for activation of the mutant proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray crystallography.
Tsunaka Y; Takano K; Matsumura H; Yamagata Y; Kanaya S
J Mol Biol; 2005 Feb; 345(5):1171-83. PubMed ID: 15644213
[TBL] [Abstract][Full Text] [Related]
2. Dispensability of glutamic acid 48 and aspartic acid 134 for Mn2+-dependent activity of Escherichia coli ribonuclease HI.
Tsunaka Y; Haruki M; Morikawa M; Oobatake M; Kanaya S
Biochemistry; 2003 Mar; 42(11):3366-74. PubMed ID: 12641469
[TBL] [Abstract][Full Text] [Related]
3. Proposal for new catalytic roles for two invariant residues in Escherichia coli ribonuclease HI.
Kashiwagi T; Jeanteur D; Haruki M; Katayanagi K; Kanaya S; Morikawa K
Protein Eng; 1996 Oct; 9(10):857-67. PubMed ID: 8931125
[TBL] [Abstract][Full Text] [Related]
4. Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus.
Chon H; Matsumura H; Koga Y; Takano K; Kanaya S
J Mol Biol; 2006 Feb; 356(1):165-78. PubMed ID: 16343535
[TBL] [Abstract][Full Text] [Related]
5. Structural and thermodynamic analyses of Escherichia coli RNase HI variant with quintuple thermostabilizing mutations.
Haruki M; Tanaka M; Motegi T; Tadokoro T; Koga Y; Takano K; Kanaya S
FEBS J; 2007 Nov; 274(22):5815-25. PubMed ID: 17944939
[TBL] [Abstract][Full Text] [Related]
6. The N-terminal hybrid binding domain of RNase HI from Thermotoga maritima is important for substrate binding and Mg2+-dependent activity.
Jongruja N; You DJ; Kanaya E; Koga Y; Takano K; Kanaya S
FEBS J; 2010 Nov; 277(21):4474-89. PubMed ID: 20875084
[TBL] [Abstract][Full Text] [Related]
7. Thermal stability of Escherichia coli ribonuclease HI and its active site mutants in the presence and absence of the Mg2+ ion. Proposal of a novel catalytic role for Glu48.
Kanaya S; Oobatake M; Liu Y
J Biol Chem; 1996 Dec; 271(51):32729-36. PubMed ID: 8955106
[TBL] [Abstract][Full Text] [Related]
8. Crystal structure of type 1 ribonuclease H from hyperthermophilic archaeon Sulfolobus tokodaii: role of arginine 118 and C-terminal anchoring.
You DJ; Chon H; Koga Y; Takano K; Kanaya S
Biochemistry; 2007 Oct; 46(41):11494-503. PubMed ID: 17892305
[TBL] [Abstract][Full Text] [Related]
9. Investigating the role of conserved residue Asp134 in Escherichia coli ribonuclease HI by site-directed random mutagenesis.
Haruki M; Noguchi E; Nakai C; Liu YY; Oobatake M; Itaya M; Kanaya S
Eur J Biochem; 1994 Mar; 220(2):623-31. PubMed ID: 8125123
[TBL] [Abstract][Full Text] [Related]
10. Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: proof for a single Mg(2+)-binding site.
Katayanagi K; Okumura M; Morikawa K
Proteins; 1993 Dec; 17(4):337-46. PubMed ID: 8108376
[TBL] [Abstract][Full Text] [Related]
11. Metal ion binding and enzymatic mechanism of Methanococcus jannaschii RNase HII.
Lai B; Li Y; Cao A; Lai L
Biochemistry; 2003 Jan; 42(3):785-91. PubMed ID: 12534291
[TBL] [Abstract][Full Text] [Related]
12. Identification of the genes encoding Mn2+-dependent RNase HII and Mg2+-dependent RNase HIII from Bacillus subtilis: classification of RNases H into three families.
Ohtani N; Haruki M; Morikawa M; Crouch RJ; Itaya M; Kanaya S
Biochemistry; 1999 Jan; 38(2):605-18. PubMed ID: 9888800
[TBL] [Abstract][Full Text] [Related]
13. Structural, thermodynamic, and mutational analyses of a psychrotrophic RNase HI.
Tadokoro T; You DJ; Abe Y; Chon H; Matsumura H; Koga Y; Takano K; Kanaya S
Biochemistry; 2007 Jun; 46(25):7460-8. PubMed ID: 17536836
[TBL] [Abstract][Full Text] [Related]
14. Destabilization of psychrotrophic RNase HI in a localized fashion as revealed by mutational and X-ray crystallographic analyses.
Rohman MS; Tadokoro T; Angkawidjaja C; Abe Y; Matsumura H; Koga Y; Takano K; Kanaya S
FEBS J; 2009 Jan; 276(2):603-13. PubMed ID: 19120449
[TBL] [Abstract][Full Text] [Related]
15. DNA cleavage by EcoRV endonuclease: two metal ions in three metal ion binding sites.
Horton NC; Perona JJ
Biochemistry; 2004 Jun; 43(22):6841-57. PubMed ID: 15170321
[TBL] [Abstract][Full Text] [Related]
16. Co-crystal of Escherichia coli RNase HI with Mn2+ ions reveals two divalent metals bound in the active site.
Goedken ER; Marqusee S
J Biol Chem; 2001 Mar; 276(10):7266-71. PubMed ID: 11083878
[TBL] [Abstract][Full Text] [Related]
17. Stabilization of ribonuclease HI from Thermus thermophilus HB8 by the spontaneous formation of an intramolecular disulfide bond.
Hirano N; Haruki M; Morikawa M; Kanaya S
Biochemistry; 1998 Sep; 37(36):12640-8. PubMed ID: 9730837
[TBL] [Abstract][Full Text] [Related]
18. Stabilization of E. coli Ribonuclease HI by the 'stability profile of mutant protein' (SPMP)-inspired random and non-random mutagenesis.
Haruki M; Saito Y; Ota M; Nishikawa K; Kanaya S
J Biotechnol; 2006 Jul; 124(3):512-22. PubMed ID: 16545882
[TBL] [Abstract][Full Text] [Related]
19. Remarkable stabilization of a psychrotrophic RNase HI by a combination of thermostabilizing mutations identified by the suppressor mutation method.
Tadokoro T; Matsushita K; Abe Y; Rohman MS; Koga Y; Takano K; Kanaya S
Biochemistry; 2008 Aug; 47(31):8040-7. PubMed ID: 18616283
[TBL] [Abstract][Full Text] [Related]
20. Catalytic efficiency and sequence selectivity of a restriction endonuclease modulated by a distal manganese ion binding site.
Sam MD; Horton NC; Nissan TA; Perona JJ
J Mol Biol; 2001 Mar; 306(4):851-61. PubMed ID: 11243793
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
