These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1114 related articles for article (PubMed ID: 15647305)

  • 21. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Phylogenetic inferences from molecular sequences: review and critique.
    Brocchieri L
    Theor Popul Biol; 2001 Feb; 59(1):27-40. PubMed ID: 11243926
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Representation in stochastic search for phylogenetic tree reconstruction.
    Weber G; Ohno-Machado L; Shieber S
    J Biomed Inform; 2006 Feb; 39(1):43-50. PubMed ID: 16359929
    [TBL] [Abstract][Full Text] [Related]  

  • 24. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
    Bininda-Emonds OR
    BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Optimizing the size of the sequence profiles to increase the accuracy of protein sequence alignments generated by profile-profile algorithms.
    Poleksic A; Fienup M
    Bioinformatics; 2008 May; 24(9):1145-53. PubMed ID: 18337259
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Inferring phylogeny from whole genomes.
    Górecki P; Tiuryn J
    Bioinformatics; 2007 Jan; 23(2):e116-22. PubMed ID: 17237078
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Classification tree based protein structure distances for testing sequence-structure correlation.
    Zintzaras E
    Comput Biol Med; 2008 Apr; 38(4):469-74. PubMed ID: 18313041
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Automatic clustering of orthologs and inparalogs shared by multiple proteomes.
    Alexeyenko A; Tamas I; Liu G; Sonnhammer EL
    Bioinformatics; 2006 Jul; 22(14):e9-15. PubMed ID: 16873526
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Phylogeny reconstruction: increasing the accuracy of pairwise distance estimation using Bayesian inference of evolutionary rates.
    Ninio M; Privman E; Pupko T; Friedman N
    Bioinformatics; 2007 Jan; 23(2):e136-41. PubMed ID: 17237082
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Graph sharpening plus graph integration: a synergy that improves protein functional classification.
    Shin H; Lisewski AM; Lichtarge O
    Bioinformatics; 2007 Dec; 23(23):3217-24. PubMed ID: 17977886
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences.
    Othman RM; Deris S; Illias RM
    J Biomed Inform; 2008 Feb; 41(1):65-81. PubMed ID: 17681495
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Phylogenetic inference from conserved sites alignments.
    Grundy WN; Naylor GJ
    J Exp Zool; 1999 Aug; 285(2):128-39. PubMed ID: 10440724
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A weighted least-squares approach for inferring phylogenies from incomplete distance matrices.
    Makarenkov V; Lapointe FJ
    Bioinformatics; 2004 Sep; 20(13):2113-21. PubMed ID: 15059836
    [TBL] [Abstract][Full Text] [Related]  

  • 34. IQPNNI: moving fast through tree space and stopping in time.
    Vinh le S; Von Haeseler A
    Mol Biol Evol; 2004 Aug; 21(8):1565-71. PubMed ID: 15163768
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Detecting non-orthology in the COGs database and other approaches grouping orthologs using genome-specific best hits.
    Dessimoz C; Boeckmann B; Roth AC; Gonnet GH
    Nucleic Acids Res; 2006; 34(11):3309-16. PubMed ID: 16835308
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Assessment of phylogenomic and orthology approaches for phylogenetic inference.
    Dutilh BE; van Noort V; van der Heijden RT; Boekhout T; Snel B; Huynen MA
    Bioinformatics; 2007 Apr; 23(7):815-24. PubMed ID: 17237036
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Efficient functional clustering of protein sequences using the Dirichlet process.
    Brown DP
    Bioinformatics; 2008 Aug; 24(16):1765-71. PubMed ID: 18511467
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Fast tandem mass spectra-based protein identification regardless of the number of spectra or potential modifications examined.
    Falkner J; Andrews P
    Bioinformatics; 2005 May; 21(10):2177-84. PubMed ID: 15746284
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Protein structure alignment considering phenotypic plasticity.
    Csaba G; Birzele F; Zimmer R
    Bioinformatics; 2008 Aug; 24(16):i98-104. PubMed ID: 18689847
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Fast embedding methods for clustering tens of thousands of sequences.
    Blackshields G; Larkin M; Wallace IM; Wilm A; Higgins DG
    Comput Biol Chem; 2008 Aug; 32(4):282-6. PubMed ID: 18450519
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 56.