BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

442 related articles for article (PubMed ID: 15650731)

  • 1. Simultaneous determination of protein structure and dynamics.
    Lindorff-Larsen K; Best RB; Depristo MA; Dobson CM; Vendruscolo M
    Nature; 2005 Jan; 433(7022):128-32. PubMed ID: 15650731
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Toward an accurate determination of free energy landscapes in solution states of proteins.
    De Simone A; Richter B; Salvatella X; Vendruscolo M
    J Am Chem Soc; 2009 Mar; 131(11):3810-1. PubMed ID: 19292482
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Determination of the transition state ensemble for the folding of ubiquitin from a combination of Phi and Psi analyses.
    Várnai P; Dobson CM; Vendruscolo M
    J Mol Biol; 2008 Mar; 377(2):575-88. PubMed ID: 18262544
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Sampling of near-native protein conformations during protein structure refinement using a coarse-grained model, normal modes, and molecular dynamics simulations.
    Stumpff-Kane AW; Maksimiak K; Lee MS; Feig M
    Proteins; 2008 Mar; 70(4):1345-56. PubMed ID: 17876825
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Determination of conformationally heterogeneous states of proteins.
    Vendruscolo M
    Curr Opin Struct Biol; 2007 Feb; 17(1):15-20. PubMed ID: 17239581
    [TBL] [Abstract][Full Text] [Related]  

  • 6. NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.
    Kitahara R; Yokoyama S; Akasaka K
    J Mol Biol; 2005 Mar; 347(2):277-85. PubMed ID: 15740740
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Ab initio computational modeling of loops in G-protein-coupled receptors: lessons from the crystal structure of rhodopsin.
    Mehler EL; Hassan SA; Kortagere S; Weinstein H
    Proteins; 2006 Aug; 64(3):673-90. PubMed ID: 16729264
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Mixture models for protein structure ensembles.
    Hirsch M; Habeck M
    Bioinformatics; 2008 Oct; 24(19):2184-92. PubMed ID: 18662925
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparing atomistic simulation data with the NMR experiment: how much can NOEs actually tell us?
    Zagrovic B; van Gunsteren WF
    Proteins; 2006 Apr; 63(1):210-8. PubMed ID: 16425239
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Scaling behavior and structure of denatured proteins.
    Ding F; Jha RK; Dokholyan NV
    Structure; 2005 Jul; 13(7):1047-54. PubMed ID: 16004876
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Geometry, energetics, and dynamics of hydrogen bonds in proteins: structural information derived from NMR scalar couplings.
    Gsponer J; Hopearuoho H; Cavalli A; Dobson CM; Vendruscolo M
    J Am Chem Soc; 2006 Nov; 128(47):15127-35. PubMed ID: 17117864
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Protein flexibility: multiple molecular dynamics simulations of insulin chain B.
    Legge FS; Budi A; Treutlein H; Yarovsky I
    Biophys Chem; 2006 Jan; 119(2):146-57. PubMed ID: 16129550
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Conformational fluctuations affect protein alignment in dilute liquid crystal media.
    Louhivuori M; Otten R; Lindorff-Larsen K; Annila A
    J Am Chem Soc; 2006 Apr; 128(13):4371-6. PubMed ID: 16569014
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Molecular dynamics simulations of the native and partially folded states of ubiquitin: influence of methanol cosolvent, pH, and temperature on the protein structure and dynamics.
    Kony DB; Hünenberger PH; van Gunsteren WF
    Protein Sci; 2007 Jun; 16(6):1101-18. PubMed ID: 17525462
    [TBL] [Abstract][Full Text] [Related]  

  • 15. OLDERADO: on-line database of ensemble representatives and domains. On Line Database of Ensemble Representatives And DOmains.
    Kelley LA; Sutcliffe MJ
    Protein Sci; 1997 Dec; 6(12):2628-30. PubMed ID: 9416612
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Residual dipolar couplings as a tool to study molecular recognition of ubiquitin.
    Lakomek NA; Lange OF; Walter KF; Farès C; Egger D; Lunkenheimer P; Meiler J; Grubmüller H; Becker S; de Groot BL; Griesinger C
    Biochem Soc Trans; 2008 Dec; 36(Pt 6):1433-7. PubMed ID: 19021570
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Atomic-level characterization of disordered protein ensembles.
    Mittag T; Forman-Kay JD
    Curr Opin Struct Biol; 2007 Feb; 17(1):3-14. PubMed ID: 17250999
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Amplitudes and directions of internal protein motions from a JAM analysis of 15N relaxation data.
    Kitao A; Wagner G
    Magn Reson Chem; 2006 Jul; 44 Spec No():S130-42. PubMed ID: 16823895
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Determination of an ensemble of structures representing the denatured state of the bovine acyl-coenzyme a binding protein.
    Lindorff-Larsen K; Kristjansdottir S; Teilum K; Fieber W; Dobson CM; Poulsen FM; Vendruscolo M
    J Am Chem Soc; 2004 Mar; 126(10):3291-9. PubMed ID: 15012160
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Interpreting NMR data for beta-peptides using molecular dynamics simulations.
    Trzesniak D; Glättli A; Jaun B; van Gunsteren WF
    J Am Chem Soc; 2005 Oct; 127(41):14320-9. PubMed ID: 16218626
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 23.