BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

616 related articles for article (PubMed ID: 15657106)

  • 1. Prediction of unfolded segments in a protein sequence based on amino acid composition.
    Coeytaux K; Poupon A
    Bioinformatics; 2005 May; 21(9):1891-900. PubMed ID: 15657106
    [TBL] [Abstract][Full Text] [Related]  

  • 2. IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.
    Dosztányi Z; Csizmok V; Tompa P; Simon I
    Bioinformatics; 2005 Aug; 21(16):3433-4. PubMed ID: 15955779
    [TBL] [Abstract][Full Text] [Related]  

  • 3. FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded.
    Prilusky J; Felder CE; Zeev-Ben-Mordehai T; Rydberg EH; Man O; Beckmann JS; Silman I; Sussman JL
    Bioinformatics; 2005 Aug; 21(16):3435-8. PubMed ID: 15955783
    [TBL] [Abstract][Full Text] [Related]  

  • 4. POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.
    Hirose S; Shimizu K; Kanai S; Kuroda Y; Noguchi T
    Bioinformatics; 2007 Aug; 23(16):2046-53. PubMed ID: 17545177
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Using Bayesian multinomial classifier to predict whether a given protein sequence is intrinsically disordered.
    Bulashevska A; Eils R
    J Theor Biol; 2008 Oct; 254(4):799-803. PubMed ID: 18611404
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein.
    Raghava GP; Han JH
    BMC Bioinformatics; 2005 Mar; 6():59. PubMed ID: 15773999
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identifying sequence regions undergoing conformational change via predicted continuum secondary structure.
    Bodén M; Bailey TL
    Bioinformatics; 2006 Aug; 22(15):1809-14. PubMed ID: 16720586
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BiasViz: visualization of amino acid biased regions in protein alignments.
    Huska MR; Buschmann H; Andrade-Navarro MA
    Bioinformatics; 2007 Nov; 23(22):3093-4. PubMed ID: 17921493
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Intrinsic disorder prediction from the analysis of multiple protein fold recognition models.
    McGuffin LJ
    Bioinformatics; 2008 Aug; 24(16):1798-804. PubMed ID: 18579567
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins.
    Baussand J; Deremble C; Carbone A
    Proteins; 2007 May; 67(3):695-708. PubMed ID: 17299747
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
    Najmanovich R; Kurbatova N; Thornton J
    Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Rapid knot detection and application to protein structure prediction.
    Khatib F; Weirauch MT; Rohl CA
    Bioinformatics; 2006 Jul; 22(14):e252-9. PubMed ID: 16873480
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Modeling protein loops with knowledge-based prediction of sequence-structure alignment.
    Peng HP; Yang AS
    Bioinformatics; 2007 Nov; 23(21):2836-42. PubMed ID: 17827204
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins.
    Yang ZR; Thomson R; McNeil P; Esnouf RM
    Bioinformatics; 2005 Aug; 21(16):3369-76. PubMed ID: 15947016
    [TBL] [Abstract][Full Text] [Related]  

  • 15. An examination of the conservation of surface patch polarity for proteins.
    Shanahan HP; Thornton JM
    Bioinformatics; 2004 Sep; 20(14):2197-204. PubMed ID: 15073014
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Cysteine separations profiles on protein sequences infer disulfide connectivity.
    Zhao E; Liu HL; Tsai CH; Tsai HK; Chan CH; Kao CY
    Bioinformatics; 2005 Apr; 21(8):1415-20. PubMed ID: 15585533
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Intramolecular surface contacts contain information about protein-protein interface regions.
    de Vries SJ; Bonvin AM
    Bioinformatics; 2006 Sep; 22(17):2094-8. PubMed ID: 16766554
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Developing a move-set for protein model refinement.
    Offman MN; Fitzjohn PW; Bates PA
    Bioinformatics; 2006 Aug; 22(15):1838-45. PubMed ID: 16705011
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Hydropathy analysis to correlate structure and function of proteins.
    Damodharan L; Pattabhi V
    Biochem Biophys Res Commun; 2004 Oct; 323(3):996-1002. PubMed ID: 15381098
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
    Pei J; Cai W; Kinch LN; Grishin NV
    Bioinformatics; 2006 Jan; 22(2):164-71. PubMed ID: 16278237
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 31.