117 related articles for article (PubMed ID: 15671117)
1. A linear programming approach for identifying a consensus sequence on DNA sequences.
Li HL; Fu CJ
Bioinformatics; 2005 May; 21(9):1838-45. PubMed ID: 15671117
[TBL] [Abstract][Full Text] [Related]
2. SITEBLAST--rapid and sensitive local alignment of genomic sequences employing motif anchors.
Michael M; Dieterich C; Vingron M
Bioinformatics; 2005 May; 21(9):2093-4. PubMed ID: 15598827
[TBL] [Abstract][Full Text] [Related]
3. Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction.
Reeder J; Giegerich R
Bioinformatics; 2005 Sep; 21(17):3516-23. PubMed ID: 16020472
[TBL] [Abstract][Full Text] [Related]
4. A fractional programming approach to efficient DNA melting temperature calculation.
Leber M; Kaderali L; Schönhuth A; Schrader R
Bioinformatics; 2005 May; 21(10):2375-82. PubMed ID: 15769839
[TBL] [Abstract][Full Text] [Related]
5. Comparison of various algorithms for recognizing short coding sequences of human genes.
Gao F; Zhang CT
Bioinformatics; 2004 Mar; 20(5):673-81. PubMed ID: 14764563
[TBL] [Abstract][Full Text] [Related]
6. PALMA: mRNA to genome alignments using large margin algorithms.
Schulze U; Hepp B; Ong CS; Rätsch G
Bioinformatics; 2007 Aug; 23(15):1892-900. PubMed ID: 17537755
[TBL] [Abstract][Full Text] [Related]
7. WindowMasker: window-based masker for sequenced genomes.
Morgulis A; Gertz EM; Schäffer AA; Agarwala R
Bioinformatics; 2006 Jan; 22(2):134-41. PubMed ID: 16287941
[TBL] [Abstract][Full Text] [Related]
8. Residue-rotamer-reduction algorithm for the protein side-chain conformation problem.
Xie W; Sahinidis NV
Bioinformatics; 2006 Jan; 22(2):188-94. PubMed ID: 16278239
[TBL] [Abstract][Full Text] [Related]
9. Evaluating putative chimeric sequences from PCR-amplified products.
Gonzalez JM; Zimmermann J; Saiz-Jimenez C
Bioinformatics; 2005 Feb; 21(3):333-7. PubMed ID: 15347575
[TBL] [Abstract][Full Text] [Related]
10. Efficient identification of DNA hybridization partners in a sequence database.
Mann TP; Noble WS
Bioinformatics; 2006 Jul; 22(14):e350-8. PubMed ID: 16873493
[TBL] [Abstract][Full Text] [Related]
11. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
Mendes ND; Casimiro AC; Santos PM; Sá-Correia I; Oliveira AL; Freitas AT
Bioinformatics; 2006 Dec; 22(24):2996-3002. PubMed ID: 17068086
[TBL] [Abstract][Full Text] [Related]
12. Context-specific independence mixture modeling for positional weight matrices.
Georgi B; Schliep A
Bioinformatics; 2006 Jul; 22(14):e166-73. PubMed ID: 16873468
[TBL] [Abstract][Full Text] [Related]
13. Fast model-based protein homology detection without alignment.
Hochreiter S; Heusel M; Obermayer K
Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
[TBL] [Abstract][Full Text] [Related]
14. CONSORF: a consensus prediction system for prokaryotic coding sequences.
Kang S; Yang SJ; Kim S; Bhak J
Bioinformatics; 2007 Nov; 23(22):3088-90. PubMed ID: 17977885
[TBL] [Abstract][Full Text] [Related]
15. Optimal robust non-unique probe selection using Integer Linear Programming.
Klau GW; Rahmann S; Schliep A; Vingron M; Reinert K
Bioinformatics; 2004 Aug; 20 Suppl 1():i186-93. PubMed ID: 15262798
[TBL] [Abstract][Full Text] [Related]
16. HomologMiner: looking for homologous genomic groups in whole genomes.
Hou M; Berman P; Hsu CH; Harris RS
Bioinformatics; 2007 Apr; 23(8):917-25. PubMed ID: 17308341
[TBL] [Abstract][Full Text] [Related]
17. GARD: a genetic algorithm for recombination detection.
Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
Bioinformatics; 2006 Dec; 22(24):3096-8. PubMed ID: 17110367
[TBL] [Abstract][Full Text] [Related]
18. SPACER: identification of cis-regulatory elements with non-contiguous critical residues.
Chakravarty A; Carlson JM; Khetani RS; DeZiel CE; Gross RH
Bioinformatics; 2007 Apr; 23(8):1029-31. PubMed ID: 17470480
[TBL] [Abstract][Full Text] [Related]
19. NcDNAlign: plausible multiple alignments of non-protein-coding genomic sequences.
Rose D; Hertel J; Reiche K; Stadler PF; Hackermüller J
Genomics; 2008 Jul; 92(1):65-74. PubMed ID: 18511233
[TBL] [Abstract][Full Text] [Related]
20. Phylo-mLogo: an interactive and hierarchical multiple-logo visualization tool for alignment of many sequences.
Shih AC; Lee DT; Peng CL; Wu YW
BMC Bioinformatics; 2007 Feb; 8():63. PubMed ID: 17319966
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
