184 related articles for article (PubMed ID: 15706507)
1. Computational prediction of operons in Synechococcus sp. WH8102.
Chen X; Su Z; Xu Y; Jiang T
Genome Inform; 2004; 15(2):211-22. PubMed ID: 15706507
[TBL] [Abstract][Full Text] [Related]
2. Operon prediction based on SVM.
Zhang GQ; Cao ZW; Luo QM; Cai YD; Li YX
Comput Biol Chem; 2006 Jun; 30(3):233-40. PubMed ID: 16716751
[TBL] [Abstract][Full Text] [Related]
3. A multi-approaches-guided genetic algorithm with application to operon prediction.
Wang S; Wang Y; Du W; Sun F; Wang X; Zhou C; Liang Y
Artif Intell Med; 2007 Oct; 41(2):151-9. PubMed ID: 17869072
[TBL] [Abstract][Full Text] [Related]
4. Operon prediction by comparative genomics: an application to the Synechococcus sp. WH8102 genome.
Chen X; Su Z; Dam P; Palenik B; Xu Y; Jiang T
Nucleic Acids Res; 2004; 32(7):2147-57. PubMed ID: 15096577
[TBL] [Abstract][Full Text] [Related]
5. Nebulon: a system for the inference of functional relationships of gene products from the rearrangement of predicted operons.
Janga SC; Collado-Vides J; Moreno-Hagelsieb G
Nucleic Acids Res; 2005; 33(8):2521-30. PubMed ID: 15867197
[TBL] [Abstract][Full Text] [Related]
6. Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context.
Moreno-Hagelsieb G; Collado-Vides J
In Silico Biol; 2002; 2(2):87-95. PubMed ID: 12066843
[TBL] [Abstract][Full Text] [Related]
7. ODB: a database of operons accumulating known operons across multiple genomes.
Okuda S; Katayama T; Kawashima S; Goto S; Kanehisa M
Nucleic Acids Res; 2006 Jan; 34(Database issue):D358-62. PubMed ID: 16381886
[TBL] [Abstract][Full Text] [Related]
8. A novel method for accurate operon predictions in all sequenced prokaryotes.
Price MN; Huang KH; Alm EJ; Arkin AP
Nucleic Acids Res; 2005; 33(3):880-92. PubMed ID: 15701760
[TBL] [Abstract][Full Text] [Related]
9. Detection of operons.
Yan Y; Moult J
Proteins; 2006 Aug; 64(3):615-28. PubMed ID: 16755590
[TBL] [Abstract][Full Text] [Related]
10. Computational inference of regulatory pathways in microbes: an application to phosphorus assimilation pathways in Synechococcus sp. WH8102.
Su Z; Dam P; Chen X; Olman V; Jiang T; Palenik B; Xu Y
Genome Inform; 2003; 14():3-13. PubMed ID: 15706515
[TBL] [Abstract][Full Text] [Related]
11. Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae.
Yan B; Methé BA; Lovley DR; Krushkal J
J Theor Biol; 2004 Sep; 230(1):133-44. PubMed ID: 15276006
[TBL] [Abstract][Full Text] [Related]
12. Operon prediction using both genome-specific and general genomic information.
Dam P; Olman V; Harris K; Su Z; Xu Y
Nucleic Acids Res; 2007; 35(1):288-98. PubMed ID: 17170009
[TBL] [Abstract][Full Text] [Related]
13. The distinctive signatures of promoter regions and operon junctions across prokaryotes.
Janga SC; Lamboy WF; Huerta AM; Moreno-Hagelsieb G
Nucleic Acids Res; 2006; 34(14):3980-7. PubMed ID: 16914446
[TBL] [Abstract][Full Text] [Related]
14. MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria.
Ranjan S; Gundu RK; Ranjan A
BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S9. PubMed ID: 17254314
[TBL] [Abstract][Full Text] [Related]
15. Conservation of adjacency as evidence of paralogous operons.
Janga SC; Moreno-Hagelsieb G
Nucleic Acids Res; 2004; 32(18):5392-7. PubMed ID: 15477389
[TBL] [Abstract][Full Text] [Related]
16. Operon prediction in Pyrococcus furiosus.
Tran TT; Dam P; Su Z; Poole FL; Adams MW; Zhou GT; Xu Y
Nucleic Acids Res; 2007; 35(1):11-20. PubMed ID: 17148478
[TBL] [Abstract][Full Text] [Related]
17. Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria.
Homma K; Fukuchi S; Nakamura Y; Gojobori T; Nishikawa K
Mol Biol Evol; 2007 Mar; 24(3):805-13. PubMed ID: 17185745
[TBL] [Abstract][Full Text] [Related]
18. DOOR: a database for prokaryotic operons.
Mao F; Dam P; Chou J; Olman V; Xu Y
Nucleic Acids Res; 2009 Jan; 37(Database issue):D459-63. PubMed ID: 18988623
[TBL] [Abstract][Full Text] [Related]
19. Revisiting operons: an analysis of the landscape of transcriptional units in E. coli.
Mao X; Ma Q; Liu B; Chen X; Zhang H; Xu Y
BMC Bioinformatics; 2015 Nov; 16():356. PubMed ID: 26538447
[TBL] [Abstract][Full Text] [Related]
20. OperomeDB: A Database of Condition-Specific Transcription Units in Prokaryotic Genomes.
Chetal K; Janga SC
Biomed Res Int; 2015; 2015():318217. PubMed ID: 26543854
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
