BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

243 related articles for article (PubMed ID: 15706577)

  • 1. Orthogonal multipolar interactions in structural chemistry and biology.
    Paulini R; Müller K; Diederich F
    Angew Chem Int Ed Engl; 2005 Mar; 44(12):1788-805. PubMed ID: 15706577
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Analysis of ligand-bound water molecules in high-resolution crystal structures of protein-ligand complexes.
    Lu Y; Wang R; Yang CY; Wang S
    J Chem Inf Model; 2007; 47(2):668-75. PubMed ID: 17266298
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evaluating protein structures determined by structural genomics consortia.
    Bhattacharya A; Tejero R; Montelione GT
    Proteins; 2007 Mar; 66(4):778-95. PubMed ID: 17186527
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Propensities of polar and aromatic amino acids in noncanonical interactions: nonbonded contacts analysis of protein-ligand complexes in crystal structures.
    Imai YN; Inoue Y; Yamamoto Y
    J Med Chem; 2007 Mar; 50(6):1189-96. PubMed ID: 17315854
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Fluorine bonding--how does it work in protein-ligand interactions?
    Zhou P; Zou J; Tian F; Shang Z
    J Chem Inf Model; 2009 Oct; 49(10):2344-55. PubMed ID: 19788294
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Phosphate recognition in structural biology.
    Hirsch AK; Fischer FR; Diederich F
    Angew Chem Int Ed Engl; 2007; 46(3):338-52. PubMed ID: 17154432
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A novel strategy for the crystallization of proteins: X-ray diffraction validation.
    Larson SB; Day JS; Cudney R; McPherson A
    Acta Crystallogr D Biol Crystallogr; 2007 Mar; 63(Pt 3):310-8. PubMed ID: 17327668
    [TBL] [Abstract][Full Text] [Related]  

  • 8. DrugScore(CSD)-knowledge-based scoring function derived from small molecule crystal data with superior recognition rate of near-native ligand poses and better affinity prediction.
    Velec HF; Gohlke H; Klebe G
    J Med Chem; 2005 Oct; 48(20):6296-303. PubMed ID: 16190756
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The limit of accuracy of protein modeling: influence of crystal packing on protein structure.
    Eyal E; Gerzon S; Potapov V; Edelman M; Sobolev V
    J Mol Biol; 2005 Aug; 351(2):431-42. PubMed ID: 16005885
    [TBL] [Abstract][Full Text] [Related]  

  • 10. LigEvolutioner, a new strategy for modification and optimization of lead compounds in receptor/ligand complexes.
    Zhou P; Tian F; Shang Z
    Chem Biol Drug Des; 2008 Dec; 72(6):525-32. PubMed ID: 19090919
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Strategies to search and design stabilizers of protein-protein interactions: a feasibility study.
    Block P; Weskamp N; Wolf A; Klebe G
    Proteins; 2007 Jul; 68(1):170-86. PubMed ID: 17393392
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Crystal structure of a glutamate/aspartate binding protein complexed with a glutamate molecule: structural basis of ligand specificity at atomic resolution.
    Hu Y; Fan CP; Fu G; Zhu D; Jin Q; Wang DC
    J Mol Biol; 2008 Sep; 382(1):99-111. PubMed ID: 18640128
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A common reference framework for analyzing/comparing proteins and ligands. Fingerprints for Ligands and Proteins (FLAP): theory and application.
    Baroni M; Cruciani G; Sciabola S; Perruccio F; Mason JS
    J Chem Inf Model; 2007; 47(2):279-94. PubMed ID: 17381166
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Analysis of molecular recognition features (MoRFs).
    Mohan A; Oldfield CJ; Radivojac P; Vacic V; Cortese MS; Dunker AK; Uversky VN
    J Mol Biol; 2006 Oct; 362(5):1043-59. PubMed ID: 16935303
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Generalized modeling of enzyme-ligand interactions using proteochemometrics and local protein substructures.
    Strömbergsson H; Kryshtafovych A; Prusis P; Fidelis K; Wikberg JE; Komorowski J; Hvidsten TR
    Proteins; 2006 Nov; 65(3):568-79. PubMed ID: 16948162
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies.
    Inbar Y; Benyamini H; Nussinov R; Wolfson HJ
    Phys Biol; 2005 Nov; 2(4):S156-65. PubMed ID: 16280621
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Molecular recognition of carbohydrates with artificial receptors: mimicking the binding motifs found in the crystal structures of protein-carbohydrate complexes.
    Mazik M; Cavga H; Jones PG
    J Am Chem Soc; 2005 Jun; 127(25):9045-52. PubMed ID: 15969582
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structural genomics of RNA.
    Doudna JA
    Nat Struct Biol; 2000 Nov; 7 Suppl():954-6. PubMed ID: 11103998
    [TBL] [Abstract][Full Text] [Related]  

  • 19. General and targeted statistical potentials for protein-ligand interactions.
    Mooij WT; Verdonk ML
    Proteins; 2005 Nov; 61(2):272-87. PubMed ID: 16106379
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Crystallization of protein-ligand complexes.
    Hassell AM; An G; Bledsoe RK; Bynum JM; Carter HL; Deng SJ; Gampe RT; Grisard TE; Madauss KP; Nolte RT; Rocque WJ; Wang L; Weaver KL; Williams SP; Wisely GB; Xu R; Shewchuk LM
    Acta Crystallogr D Biol Crystallogr; 2007 Jan; 63(Pt 1):72-9. PubMed ID: 17164529
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.