These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
266 related articles for article (PubMed ID: 15757509)
1. Gene fusions and gene duplications: relevance to genomic annotation and functional analysis. Serres MH; Riley M BMC Genomics; 2005 Mar; 6():33. PubMed ID: 15757509 [TBL] [Abstract][Full Text] [Related]
2. Prediction of functional modules based on gene distributions in microbial genomes. Wu H; Mao F; Su Z; Olman V; Xu Y Genome Inform; 2005; 16(2):247-59. PubMed ID: 16901107 [TBL] [Abstract][Full Text] [Related]
3. GenProtEC: an updated and improved analysis of functions of Escherichia coli K-12 proteins. Serres MH; Goswami S; Riley M Nucleic Acids Res; 2004 Jan; 32(Database issue):D300-2. PubMed ID: 14681418 [TBL] [Abstract][Full Text] [Related]
4. Protein evolution viewed through Escherichia coli protein sequences: introducing the notion of a structural segment of homology, the module. Riley M; Labedan B J Mol Biol; 1997 May; 268(5):857-68. PubMed ID: 9180377 [TBL] [Abstract][Full Text] [Related]
5. Microbial source tracking by DNA sequence analysis of the Escherichia coli malate dehydrogenase gene. Ivanetich KM; Hsu PH; Wunderlich KM; Messenger E; Walkup WG; Scott TM; Lukasik J; Davis J J Microbiol Methods; 2006 Dec; 67(3):507-26. PubMed ID: 16973226 [TBL] [Abstract][Full Text] [Related]
6. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I; Berndt P; Malo C; Rodriguez S; Brunisholz RA; Pragai Z; Arnold S; Langen H; Wyss M Proteomics; 2007 Apr; 7(7):1097-106. PubMed ID: 17366475 [TBL] [Abstract][Full Text] [Related]
7. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes]. Zhang DL; Ji L; Li YD Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601 [TBL] [Abstract][Full Text] [Related]
8. Prediction of functional modules based on comparative genome analysis and Gene Ontology application. Wu H; Su Z; Mao F; Olman V; Xu Y Nucleic Acids Res; 2005; 33(9):2822-37. PubMed ID: 15901854 [TBL] [Abstract][Full Text] [Related]
9. Physiological genomics of Escherichia coli protein families. Liang P; Labedan B; Riley M Physiol Genomics; 2002; 9(1):15-26. PubMed ID: 11948287 [TBL] [Abstract][Full Text] [Related]
10. GATA: a graphic alignment tool for comparative sequence analysis. Nix DA; Eisen MB BMC Bioinformatics; 2005 Jan; 6():9. PubMed ID: 15655071 [TBL] [Abstract][Full Text] [Related]
11. Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach. Ma HW; Buer J; Zeng AP BMC Bioinformatics; 2004 Dec; 5():199. PubMed ID: 15603590 [TBL] [Abstract][Full Text] [Related]
12. A functional update of the Escherichia coli K-12 genome. Serres MH; Gopal S; Nahum LA; Liang P; Gaasterland T; Riley M Genome Biol; 2001; 2(9):RESEARCH0035. PubMed ID: 11574054 [TBL] [Abstract][Full Text] [Related]
13. Identification of Yersinia pestis and Escherichia coli strains by whole cell and outer membrane protein extracts with mass spectrometry-based proteomics. Jabbour RE; Wade MM; Deshpande SV; Stanford MF; Wick CH; Zulich AW; Snyder AP J Proteome Res; 2010 Jul; 9(7):3647-55. PubMed ID: 20486690 [TBL] [Abstract][Full Text] [Related]
14. Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores. Wilson CA; Kreychman J; Gerstein M J Mol Biol; 2000 Mar; 297(1):233-49. PubMed ID: 10704319 [TBL] [Abstract][Full Text] [Related]
15. Low molecular weight proteins: a challenge for post-genomic research. Rudd KE; Humphery-Smith I; Wasinger VC; Bairoch A Electrophoresis; 1998 Apr; 19(4):536-44. PubMed ID: 9588799 [TBL] [Abstract][Full Text] [Related]
17. Automatic annotation of protein function based on family identification. Abascal F; Valencia A Proteins; 2003 Nov; 53(3):683-92. PubMed ID: 14579359 [TBL] [Abstract][Full Text] [Related]
18. Understanding the differences between genome sequences of Escherichia coli B strains REL606 and BL21(DE3) and comparison of the E. coli B and K-12 genomes. Studier FW; Daegelen P; Lenski RE; Maslov S; Kim JF J Mol Biol; 2009 Dec; 394(4):653-80. PubMed ID: 19765592 [TBL] [Abstract][Full Text] [Related]
19. The applications of systematic in-frame, single-gene knockout mutant collection of Escherichia coli K-12. Baba T; Huan HC; Datsenko K; Wanner BL; Mori H Methods Mol Biol; 2008; 416():183-94. PubMed ID: 18392968 [TBL] [Abstract][Full Text] [Related]
20. A genome rearrangement has orphaned the Escherichia coli K-12 AcpT phosphopantetheinyl transferase from its cognate Escherichia coli O157:H7 substrates. De Lay NR; Cronan JE Mol Microbiol; 2006 Jul; 61(1):232-42. PubMed ID: 16824108 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]