572 related articles for article (PubMed ID: 15769473)
1. The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.
Dosztányi Z; Csizmók V; Tompa P; Simon I
J Mol Biol; 2005 Apr; 347(4):827-39. PubMed ID: 15769473
[TBL] [Abstract][Full Text] [Related]
2. IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.
Dosztányi Z; Csizmok V; Tompa P; Simon I
Bioinformatics; 2005 Aug; 21(16):3433-4. PubMed ID: 15955779
[TBL] [Abstract][Full Text] [Related]
3. Novel knowledge-based mean force potential at atomic level.
Melo F; Feytmans E
J Mol Biol; 1997 Mar; 267(1):207-22. PubMed ID: 9096219
[TBL] [Abstract][Full Text] [Related]
4. Accurate prediction for atomic-level protein design and its application in diversifying the near-optimal sequence space.
Fromer M; Yanover C
Proteins; 2009 May; 75(3):682-705. PubMed ID: 19003998
[TBL] [Abstract][Full Text] [Related]
5. Molecular principles of the interactions of disordered proteins.
Mészáros B; Tompa P; Simon I; Dosztányi Z
J Mol Biol; 2007 Sep; 372(2):549-61. PubMed ID: 17681540
[TBL] [Abstract][Full Text] [Related]
6. Another look at the conditions for the extraction of protein knowledge-based potentials.
Betancourt MR
Proteins; 2009 Jul; 76(1):72-85. PubMed ID: 19089977
[TBL] [Abstract][Full Text] [Related]
7. Intrinsic disorder in the Protein Data Bank.
Le Gall T; Romero PR; Cortese MS; Uversky VN; Dunker AK
J Biomol Struct Dyn; 2007 Feb; 24(4):325-42. PubMed ID: 17206849
[TBL] [Abstract][Full Text] [Related]
8. An empirical energy potential with a reference state for protein fold and sequence recognition.
Miyazawa S; Jernigan RL
Proteins; 1999 Aug; 36(3):357-69. PubMed ID: 10409829
[TBL] [Abstract][Full Text] [Related]
9. Using Bayesian multinomial classifier to predict whether a given protein sequence is intrinsically disordered.
Bulashevska A; Eils R
J Theor Biol; 2008 Oct; 254(4):799-803. PubMed ID: 18611404
[TBL] [Abstract][Full Text] [Related]
10. Reduced amino acid alphabet is sufficient to accurately recognize intrinsically disordered protein.
Weathers EA; Paulaitis ME; Woolf TB; Hoh JH
FEBS Lett; 2004 Oct; 576(3):348-52. PubMed ID: 15498561
[TBL] [Abstract][Full Text] [Related]
11. Use of variable selection in modeling the secondary structural content of proteins from their composition of amino acid residues.
Pilizota T; Lucić B; Trinajstić N
J Chem Inf Comput Sci; 2004; 44(1):113-21. PubMed ID: 14741017
[TBL] [Abstract][Full Text] [Related]
12. Identifying stabilizing key residues in proteins using interresidue interaction energy matrix.
Bendová-Biedermannová L; Hobza P; Vondrásek J
Proteins; 2008 Jul; 72(1):402-13. PubMed ID: 18214960
[TBL] [Abstract][Full Text] [Related]
13. Prediction of protein disorder.
Dosztányi Z; Tompa P
Methods Mol Biol; 2008; 426():103-15. PubMed ID: 18542859
[TBL] [Abstract][Full Text] [Related]
14. Evaluation of short-range interactions as secondary structure energies for protein fold and sequence recognition.
Miyazawa S; Jernigan RL
Proteins; 1999 Aug; 36(3):347-56. PubMed ID: 10409828
[TBL] [Abstract][Full Text] [Related]
15. A key driving force in determination of protein structural classes.
Chou KC
Biochem Biophys Res Commun; 1999 Oct; 264(1):216-24. PubMed ID: 10527868
[TBL] [Abstract][Full Text] [Related]
16. Proteins of the same fold and unrelated sequences have similar amino acid composition.
Ofran Y; Margalit H
Proteins; 2006 Jul; 64(1):275-9. PubMed ID: 16565950
[TBL] [Abstract][Full Text] [Related]
17. Taking advantage of local structure descriptors to analyze interresidue contacts in protein structures and protein complexes.
Martin J; Regad L; Etchebest C; Camproux AC
Proteins; 2008 Nov; 73(3):672-89. PubMed ID: 18491388
[TBL] [Abstract][Full Text] [Related]
18. Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein.
Raghava GP; Han JH
BMC Bioinformatics; 2005 Mar; 6():59. PubMed ID: 15773999
[TBL] [Abstract][Full Text] [Related]
19. Intrinsically disordered protein from a pathogenic mesophile Mycobacterium tuberculosis adopts structured conformation at high temperature.
Kumar N; Shukla S; Kumar S; Suryawanshi A; Chaudhry U; Ramachandran S; Maiti S
Proteins; 2008 May; 71(3):1123-33. PubMed ID: 18004752
[TBL] [Abstract][Full Text] [Related]
20. Characterization of the amino acid contribution to the folding degree of proteins.
Estrada E
Proteins; 2004 Mar; 54(4):727-37. PubMed ID: 14997568
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]