189 related articles for article (PubMed ID: 15905276)
1. CGHAnalyzer: a stand-alone software package for cancer genome analysis using array-based DNA copy number data.
Margolin AA; Greshock J; Naylor TL; Mosse Y; Maris JM; Bignell G; Saeed AI; Quackenbush J; Weber BL
Bioinformatics; 2005 Aug; 21(15):3308-11. PubMed ID: 15905276
[TBL] [Abstract][Full Text] [Related]
2. DNA copy number data analysis using the CGHAnalyzer software suite.
Greshock J
Methods Mol Biol; 2007; 396():255-66. PubMed ID: 18025697
[TBL] [Abstract][Full Text] [Related]
3. Visualization of genomic aberrations using Affymetrix SNP arrays.
Müller A; Holzmann K; Kestler HA
Bioinformatics; 2007 Feb; 23(4):496-7. PubMed ID: 17138589
[TBL] [Abstract][Full Text] [Related]
4. GEAR: genomic enrichment analysis of regional DNA copy number changes.
Kim TM; Jung YC; Rhyu MG; Jung MH; Chung YJ
Bioinformatics; 2008 Feb; 24(3):420-1. PubMed ID: 18037611
[TBL] [Abstract][Full Text] [Related]
5. CGHPRO -- a comprehensive data analysis tool for array CGH.
Chen W; Erdogan F; Ropers HH; Lenzner S; Ullmann R
BMC Bioinformatics; 2005 Apr; 6():85. PubMed ID: 15807904
[TBL] [Abstract][Full Text] [Related]
6. SeeGH--a software tool for visualization of whole genome array comparative genomic hybridization data.
Chi B; DeLeeuw RJ; Coe BP; MacAulay C; Lam WL
BMC Bioinformatics; 2004 Feb; 5():13. PubMed ID: 15040819
[TBL] [Abstract][Full Text] [Related]
7. ArrayFusion: a web application for multi-dimensional analysis of CGH, SNP and microarray data.
Yang TP; Chang TY; Lin CH; Hsu MT; Wang HW
Bioinformatics; 2006 Nov; 22(21):2697-8. PubMed ID: 16935928
[TBL] [Abstract][Full Text] [Related]
8. VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles.
La Rosa P; Viara E; Hupé P; Pierron G; Liva S; Neuvial P; Brito I; Lair S; Servant N; Robine N; Manié E; Brennetot C; Janoueix-Lerosey I; Raynal V; Gruel N; Rouveirol C; Stransky N; Stern MH; Delattre O; Aurias A; Radvanyi F; Barillot E
Bioinformatics; 2006 Sep; 22(17):2066-73. PubMed ID: 16820431
[TBL] [Abstract][Full Text] [Related]
9. Rainbow: a toolbox for phylogenetic supertree construction and analysis.
Chen D; Eulenstein O; Fernández-Baca D
Bioinformatics; 2004 Nov; 20(16):2872-3. PubMed ID: 15145807
[TBL] [Abstract][Full Text] [Related]
10. IntegratedMap: a Web interface for integrating genetic map data.
Yang H; Wang H; Gingle AR
Bioinformatics; 2005 May; 21(9):2126-7. PubMed ID: 15657101
[TBL] [Abstract][Full Text] [Related]
11. ALOHOMORA: a tool for linkage analysis using 10K SNP array data.
Rüschendorf F; Nürnberg P
Bioinformatics; 2005 May; 21(9):2123-5. PubMed ID: 15647291
[TBL] [Abstract][Full Text] [Related]
12. MAGIC Tool: integrated microarray data analysis.
Heyer LJ; Moskowitz DZ; Abele JA; Karnik P; Choi D; Campbell AM; Oldham EE; Akin BK
Bioinformatics; 2005 May; 21(9):2114-5. PubMed ID: 15647303
[TBL] [Abstract][Full Text] [Related]
13. snp.plotter: an R-based SNP/haplotype association and linkage disequilibrium plotting package.
Luna A; Nicodemus KK
Bioinformatics; 2007 Mar; 23(6):774-6. PubMed ID: 17234637
[TBL] [Abstract][Full Text] [Related]
14. ArrayCyGHt: a web application for analysis and visualization of array-CGH data.
Kim SY; Nam SW; Lee SH; Park WS; Yoo NJ; Lee JY; Chung YJ
Bioinformatics; 2005 May; 21(10):2554-5. PubMed ID: 15746288
[TBL] [Abstract][Full Text] [Related]
15. CGHcall: calling aberrations for array CGH tumor profiles.
van de Wiel MA; Kim KI; Vosse SJ; van Wieringen WN; Wilting SM; Ylstra B
Bioinformatics; 2007 Apr; 23(7):892-4. PubMed ID: 17267432
[TBL] [Abstract][Full Text] [Related]
16. Breakpoint identification and smoothing of array comparative genomic hybridization data.
Jong K; Marchiori E; Meijer G; Vaart AV; Ylstra B
Bioinformatics; 2004 Dec; 20(18):3636-7. PubMed ID: 15201182
[TBL] [Abstract][Full Text] [Related]
17. Combo: a whole genome comparative browser.
Engels R; Yu T; Burge C; Mesirov JP; DeCaprio D; Galagan JE
Bioinformatics; 2006 Jul; 22(14):1782-3. PubMed ID: 16709588
[TBL] [Abstract][Full Text] [Related]
18. Codelink: an R package for analysis of GE healthcare gene expression bioarrays.
Diez D; Alvarez R; Dopazo A
Bioinformatics; 2007 May; 23(9):1168-9. PubMed ID: 17344240
[TBL] [Abstract][Full Text] [Related]
19. JCell--a Java-based framework for inferring regulatory networks from time series data.
Spieth C; Supper J; Streichert F; Speer N; Zell A
Bioinformatics; 2006 Aug; 22(16):2051-2. PubMed ID: 16782725
[TBL] [Abstract][Full Text] [Related]
20. VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data.
Vilella AJ; Blanco-Garcia A; Hutter S; Rozas J
Bioinformatics; 2005 Jun; 21(11):2791-3. PubMed ID: 15814564
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
