These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

186 related articles for article (PubMed ID: 15905276)

  • 1. CGHAnalyzer: a stand-alone software package for cancer genome analysis using array-based DNA copy number data.
    Margolin AA; Greshock J; Naylor TL; Mosse Y; Maris JM; Bignell G; Saeed AI; Quackenbush J; Weber BL
    Bioinformatics; 2005 Aug; 21(15):3308-11. PubMed ID: 15905276
    [TBL] [Abstract][Full Text] [Related]  

  • 2. DNA copy number data analysis using the CGHAnalyzer software suite.
    Greshock J
    Methods Mol Biol; 2007; 396():255-66. PubMed ID: 18025697
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Visualization of genomic aberrations using Affymetrix SNP arrays.
    Müller A; Holzmann K; Kestler HA
    Bioinformatics; 2007 Feb; 23(4):496-7. PubMed ID: 17138589
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GEAR: genomic enrichment analysis of regional DNA copy number changes.
    Kim TM; Jung YC; Rhyu MG; Jung MH; Chung YJ
    Bioinformatics; 2008 Feb; 24(3):420-1. PubMed ID: 18037611
    [TBL] [Abstract][Full Text] [Related]  

  • 5. CGHPRO -- a comprehensive data analysis tool for array CGH.
    Chen W; Erdogan F; Ropers HH; Lenzner S; Ullmann R
    BMC Bioinformatics; 2005 Apr; 6():85. PubMed ID: 15807904
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SeeGH--a software tool for visualization of whole genome array comparative genomic hybridization data.
    Chi B; DeLeeuw RJ; Coe BP; MacAulay C; Lam WL
    BMC Bioinformatics; 2004 Feb; 5():13. PubMed ID: 15040819
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ArrayFusion: a web application for multi-dimensional analysis of CGH, SNP and microarray data.
    Yang TP; Chang TY; Lin CH; Hsu MT; Wang HW
    Bioinformatics; 2006 Nov; 22(21):2697-8. PubMed ID: 16935928
    [TBL] [Abstract][Full Text] [Related]  

  • 8. VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles.
    La Rosa P; Viara E; Hupé P; Pierron G; Liva S; Neuvial P; Brito I; Lair S; Servant N; Robine N; Manié E; Brennetot C; Janoueix-Lerosey I; Raynal V; Gruel N; Rouveirol C; Stransky N; Stern MH; Delattre O; Aurias A; Radvanyi F; Barillot E
    Bioinformatics; 2006 Sep; 22(17):2066-73. PubMed ID: 16820431
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Rainbow: a toolbox for phylogenetic supertree construction and analysis.
    Chen D; Eulenstein O; Fernández-Baca D
    Bioinformatics; 2004 Nov; 20(16):2872-3. PubMed ID: 15145807
    [TBL] [Abstract][Full Text] [Related]  

  • 10. IntegratedMap: a Web interface for integrating genetic map data.
    Yang H; Wang H; Gingle AR
    Bioinformatics; 2005 May; 21(9):2126-7. PubMed ID: 15657101
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ALOHOMORA: a tool for linkage analysis using 10K SNP array data.
    Rüschendorf F; Nürnberg P
    Bioinformatics; 2005 May; 21(9):2123-5. PubMed ID: 15647291
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MAGIC Tool: integrated microarray data analysis.
    Heyer LJ; Moskowitz DZ; Abele JA; Karnik P; Choi D; Campbell AM; Oldham EE; Akin BK
    Bioinformatics; 2005 May; 21(9):2114-5. PubMed ID: 15647303
    [TBL] [Abstract][Full Text] [Related]  

  • 13. snp.plotter: an R-based SNP/haplotype association and linkage disequilibrium plotting package.
    Luna A; Nicodemus KK
    Bioinformatics; 2007 Mar; 23(6):774-6. PubMed ID: 17234637
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ArrayCyGHt: a web application for analysis and visualization of array-CGH data.
    Kim SY; Nam SW; Lee SH; Park WS; Yoo NJ; Lee JY; Chung YJ
    Bioinformatics; 2005 May; 21(10):2554-5. PubMed ID: 15746288
    [TBL] [Abstract][Full Text] [Related]  

  • 15. CGHcall: calling aberrations for array CGH tumor profiles.
    van de Wiel MA; Kim KI; Vosse SJ; van Wieringen WN; Wilting SM; Ylstra B
    Bioinformatics; 2007 Apr; 23(7):892-4. PubMed ID: 17267432
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Breakpoint identification and smoothing of array comparative genomic hybridization data.
    Jong K; Marchiori E; Meijer G; Vaart AV; Ylstra B
    Bioinformatics; 2004 Dec; 20(18):3636-7. PubMed ID: 15201182
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Combo: a whole genome comparative browser.
    Engels R; Yu T; Burge C; Mesirov JP; DeCaprio D; Galagan JE
    Bioinformatics; 2006 Jul; 22(14):1782-3. PubMed ID: 16709588
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Codelink: an R package for analysis of GE healthcare gene expression bioarrays.
    Diez D; Alvarez R; Dopazo A
    Bioinformatics; 2007 May; 23(9):1168-9. PubMed ID: 17344240
    [TBL] [Abstract][Full Text] [Related]  

  • 19. JCell--a Java-based framework for inferring regulatory networks from time series data.
    Spieth C; Supper J; Streichert F; Speer N; Zell A
    Bioinformatics; 2006 Aug; 22(16):2051-2. PubMed ID: 16782725
    [TBL] [Abstract][Full Text] [Related]  

  • 20. VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data.
    Vilella AJ; Blanco-Garcia A; Hutter S; Rozas J
    Bioinformatics; 2005 Jun; 21(11):2791-3. PubMed ID: 15814564
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.