875 related articles for article (PubMed ID: 15932645)
1. An emerging phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences.
Brochier C; Forterre P; Gribaldo S
BMC Evol Biol; 2005 Jun; 5():36. PubMed ID: 15932645
[TBL] [Abstract][Full Text] [Related]
2. Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox.
Brochier C; Forterre P; Gribaldo S
Genome Biol; 2004; 5(3):R17. PubMed ID: 15003120
[TBL] [Abstract][Full Text] [Related]
3. Extending the conserved phylogenetic core of archaea disentangles the evolution of the third domain of life.
Petitjean C; Deschamps P; López-García P; Moreira D; Brochier-Armanet C
Mol Biol Evol; 2015 May; 32(5):1242-54. PubMed ID: 25660375
[TBL] [Abstract][Full Text] [Related]
4. Archaeal phylogeny based on ribosomal proteins.
Matte-Tailliez O; Brochier C; Forterre P; Philippe H
Mol Biol Evol; 2002 May; 19(5):631-9. PubMed ID: 11961097
[TBL] [Abstract][Full Text] [Related]
5. Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in archaea.
Groussin M; Gouy M
Mol Biol Evol; 2011 Sep; 28(9):2661-74. PubMed ID: 21498602
[TBL] [Abstract][Full Text] [Related]
6. Defining the core of nontransferable prokaryotic genes: the euryarchaeal core.
Nesbø CL; Boucher Y; Doolittle WF
J Mol Evol; 2001; 53(4-5):340-50. PubMed ID: 11675594
[TBL] [Abstract][Full Text] [Related]
7. Rooting the domain archaea by phylogenomic analysis supports the foundation of the new kingdom Proteoarchaeota.
Petitjean C; Deschamps P; López-García P; Moreira D
Genome Biol Evol; 2014 Dec; 7(1):191-204. PubMed ID: 25527841
[TBL] [Abstract][Full Text] [Related]
8. Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparative-genomic approach.
Koonin EV; Wolf YI; Aravind L
Genome Res; 2001 Feb; 11(2):240-52. PubMed ID: 11157787
[TBL] [Abstract][Full Text] [Related]
9. Alternative methods for concatenation of core genes indicate a lack of resolution in deep nodes of the prokaryotic phylogeny.
Bapteste E; Susko E; Leigh J; Ruiz-Trillo I; Bucknam J; Doolittle WF
Mol Biol Evol; 2008 Jan; 25(1):83-91. PubMed ID: 17940208
[TBL] [Abstract][Full Text] [Related]
10. Computing prokaryotic gene ubiquity: rescuing the core from extinction.
Charlebois RL; Doolittle WF
Genome Res; 2004 Dec; 14(12):2469-77. PubMed ID: 15574825
[TBL] [Abstract][Full Text] [Related]
11. Accounting for evolutionary rate variation among sequence sites consistently changes universal phylogenies deduced from rRNA and protein-coding genes.
Tourasse NJ; Gouy M
Mol Phylogenet Evol; 1999 Oct; 13(1):159-68. PubMed ID: 10508549
[TBL] [Abstract][Full Text] [Related]
12. Do orthologous gene phylogenies really support tree-thinking?
Bapteste E; Susko E; Leigh J; MacLeod D; Charlebois RL; Doolittle WF
BMC Evol Biol; 2005 May; 5():33. PubMed ID: 15913459
[TBL] [Abstract][Full Text] [Related]
13. The effects of model choice and mitigating bias on the ribosomal tree of life.
Lasek-Nesselquist E; Gogarten JP
Mol Phylogenet Evol; 2013 Oct; 69(1):17-38. PubMed ID: 23707703
[TBL] [Abstract][Full Text] [Related]
14. Bayesian phylogenetic analysis reveals two-domain topology of S-adenosylhomocysteine hydrolase protein sequences.
Stepkowski T; Brzeziński K; Legocki AB; Jaskólski M; Béna G
Mol Phylogenet Evol; 2005 Jan; 34(1):15-28. PubMed ID: 15579379
[TBL] [Abstract][Full Text] [Related]
15. Genome trees constructed using five different approaches suggest new major bacterial clades.
Wolf YI; Rogozin IB; Grishin NV; Tatusov RL; Koonin EV
BMC Evol Biol; 2001 Oct; 1():8. PubMed ID: 11734060
[TBL] [Abstract][Full Text] [Related]
16. Evolution of the RNA polymerase B' subunit gene (rpoB') in Halobacteriales: a complementary molecular marker to the SSU rRNA gene.
Walsh DA; Bapteste E; Kamekura M; Doolittle WF
Mol Biol Evol; 2004 Dec; 21(12):2340-51. PubMed ID: 15356285
[TBL] [Abstract][Full Text] [Related]
17. Low-pass sequencing for microbial comparative genomics.
Goo YA; Roach J; Glusman G; Baliga NS; Deutsch K; Pan M; Kennedy S; DasSarma S; Ng WV; Hood L
BMC Genomics; 2004 Jan; 5(1):3. PubMed ID: 14718067
[TBL] [Abstract][Full Text] [Related]
18. Phylogenetic analyses of two "archaeal" genes in thermotoga maritima reveal multiple transfers between archaea and bacteria.
Nesbo CL; L'Haridon S; Stetter KO; Doolittle WF
Mol Biol Evol; 2001 Mar; 18(3):362-75. PubMed ID: 11230537
[TBL] [Abstract][Full Text] [Related]
19. Nanoarchaea: representatives of a novel archaeal phylum or a fast-evolving euryarchaeal lineage related to Thermococcales?
Brochier C; Gribaldo S; Zivanovic Y; Confalonieri F; Forterre P
Genome Biol; 2005; 6(5):R42. PubMed ID: 15892870
[TBL] [Abstract][Full Text] [Related]
20. New findings on evolution of metal homeostasis genes: evidence from comparative genome analysis of bacteria and archaea.
Coombs JM; Barkay T
Appl Environ Microbiol; 2005 Nov; 71(11):7083-91. PubMed ID: 16269744
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
