BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

59 related articles for article (PubMed ID: 15958306)

  • 1. [Analysis and realization of the method for predicting physical pathways of allosteric communication in a protein family].
    Tan XD; Lu ZY; Su YC; Dong AR; Deng QK
    Di Yi Jun Yi Da Xue Xue Bao; 2005 Jun; 25(6):675-7, 681. PubMed ID: 15958306
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Evolutionarily conserved networks of residues mediate allosteric communication in proteins.
    Süel GM; Lockless SW; Wall MA; Ranganathan R
    Nat Struct Biol; 2003 Jan; 10(1):59-69. PubMed ID: 12483203
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Prediction of Ras-effector interactions using position energy matrices.
    Kiel C; Serrano L
    Bioinformatics; 2007 Sep; 23(17):2226-30. PubMed ID: 17599936
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Signal-3L: A 3-layer approach for predicting signal peptides.
    Shen HB; Chou KC
    Biochem Biophys Res Commun; 2007 Nov; 363(2):297-303. PubMed ID: 17880924
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
    Najmanovich R; Kurbatova N; Thornton J
    Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
    Pei J; Cai W; Kinch LN; Grishin NV
    Bioinformatics; 2006 Jan; 22(2):164-71. PubMed ID: 16278237
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Moment invariants as shape recognition technique for comparing protein binding sites.
    Sommer I; Müller O; Domingues FS; Sander O; Weickert J; Lengauer T
    Bioinformatics; 2007 Dec; 23(23):3139-46. PubMed ID: 17977888
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL.
    Chennubhotla C; Yang Z; Bahar I
    Mol Biosyst; 2008 Apr; 4(4):287-92. PubMed ID: 18354781
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Using optimized evidence-theoretic K-nearest neighbor classifier and pseudo-amino acid composition to predict membrane protein types.
    Shen H; Chou KC
    Biochem Biophys Res Commun; 2005 Aug; 334(1):288-92. PubMed ID: 16002049
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Real value prediction of solvent accessibility in proteins using multiple sequence alignment and secondary structure.
    Garg A; Kaur H; Raghava GP
    Proteins; 2005 Nov; 61(2):318-24. PubMed ID: 16106377
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs.
    Shamim MT; Anwaruddin M; Nagarajaram HA
    Bioinformatics; 2007 Dec; 23(24):3320-7. PubMed ID: 17989092
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Predicting protein function from sequence and structural data.
    Watson JD; Laskowski RA; Thornton JM
    Curr Opin Struct Biol; 2005 Jun; 15(3):275-84. PubMed ID: 15963890
    [TBL] [Abstract][Full Text] [Related]  

  • 13. BiasViz: visualization of amino acid biased regions in protein alignments.
    Huska MR; Buschmann H; Andrade-Navarro MA
    Bioinformatics; 2007 Nov; 23(22):3093-4. PubMed ID: 17921493
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions.
    Sato T; Yamanishi Y; Horimoto K; Kanehisa M; Toh H
    Bioinformatics; 2006 Oct; 22(20):2488-92. PubMed ID: 16882650
    [TBL] [Abstract][Full Text] [Related]  

  • 15. An ensemble of K-local hyperplanes for predicting protein-protein interactions.
    Nanni L; Lumini A
    Bioinformatics; 2006 May; 22(10):1207-10. PubMed ID: 16481334
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Modeling protein loops with knowledge-based prediction of sequence-structure alignment.
    Peng HP; Yang AS
    Bioinformatics; 2007 Nov; 23(21):2836-42. PubMed ID: 17827204
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Modelling interaction sites in protein domains with interaction profile hidden Markov models.
    Friedrich T; Pils B; Dandekar T; Schultz J; Müller T
    Bioinformatics; 2006 Dec; 22(23):2851-7. PubMed ID: 17000753
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Highly accurate and consistent method for prediction of helix and strand content from primary protein sequences.
    Ruan J; Wang K; Yang J; Kurgan LA; Cios K
    Artif Intell Med; 2005; 35(1-2):19-35. PubMed ID: 16081261
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Predicting disulfide connectivity from protein sequence using multiple sequence feature vectors and secondary structure.
    Song J; Yuan Z; Tan H; Huber T; Burrage K
    Bioinformatics; 2007 Dec; 23(23):3147-54. PubMed ID: 17942444
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Prediction of protein structural classes by Chou's pseudo amino acid composition: approached using continuous wavelet transform and principal component analysis.
    Li ZC; Zhou XB; Dai Z; Zou XY
    Amino Acids; 2009 Jul; 37(2):415-25. PubMed ID: 18726140
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 3.