These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
344 related articles for article (PubMed ID: 15961438)
41. Fast and accurate database homology search using upper bounds of local alignment scores. Itoh M; Goto S; Akutsu T; Kanehisa M Bioinformatics; 2005 Apr; 21(7):912-21. PubMed ID: 15509606 [TBL] [Abstract][Full Text] [Related]
42. Finding homologs in amino acid sequences using network BLAST searches. Ladunga I Curr Protoc Bioinformatics; 2003 Feb; Chapter 3():Unit 3.4. PubMed ID: 18428697 [TBL] [Abstract][Full Text] [Related]
43. Parallel BLAST on split databases. Mathog DR Bioinformatics; 2003 Sep; 19(14):1865-6. PubMed ID: 14512366 [TBL] [Abstract][Full Text] [Related]
44. Using Dali for structural comparison of proteins. Holm L; Kääriäinen S; Wilton C; Plewczynski D Curr Protoc Bioinformatics; 2006 Jul; Chapter 5():Unit 5.5. PubMed ID: 18428766 [TBL] [Abstract][Full Text] [Related]
45. An extensible automated protein annotation tool: standardizing input and output using validated XML. Deevi SV; Martin AC Bioinformatics; 2006 Feb; 22(3):291-6. PubMed ID: 16339285 [TBL] [Abstract][Full Text] [Related]
46. MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data. Katajamaa M; Miettinen J; Oresic M Bioinformatics; 2006 Mar; 22(5):634-6. PubMed ID: 16403790 [TBL] [Abstract][Full Text] [Related]
47. PSI: indexing protein structures for fast similarity search. Camoglu O; Kahveci T; Singh AK Bioinformatics; 2003; 19 Suppl 1():i81-3. PubMed ID: 12855441 [TBL] [Abstract][Full Text] [Related]
48. Searching sequence databases via de novo peptide sequencing by tandem mass spectrometry. Johnson RS; Taylor JA Mol Biotechnol; 2002 Nov; 22(3):301-15. PubMed ID: 12448884 [TBL] [Abstract][Full Text] [Related]
49. A lazy data mining approach for protein classification. Merschmann L; Plastino A IEEE Trans Nanobioscience; 2007 Mar; 6(1):36-42. PubMed ID: 17393848 [TBL] [Abstract][Full Text] [Related]
50. Rapid motif-based prediction of circular permutations in multi-domain proteins. Weiner J; Thomas G; Bornberg-Bauer E Bioinformatics; 2005 Apr; 21(7):932-7. PubMed ID: 15788783 [TBL] [Abstract][Full Text] [Related]
51. Intersect: identification and visualization of overlaps in database search results. Pegg SC; Novak WR; Babbitt PC Bioinformatics; 2003 Oct; 19(15):1997-9. PubMed ID: 14555634 [TBL] [Abstract][Full Text] [Related]
52. AliasServer: a web server to handle multiple aliases used to refer to proteins. Iragne F; Barré A; Goffard N; De Daruvar A Bioinformatics; 2004 Sep; 20(14):2331-2. PubMed ID: 15059813 [TBL] [Abstract][Full Text] [Related]
53. SPIDER: software for protein identification from sequence tags with de novo sequencing error. Han Y; Ma B; Zhang K Proc IEEE Comput Syst Bioinform Conf; 2004; ():206-15. PubMed ID: 16448014 [TBL] [Abstract][Full Text] [Related]
54. Soap-HT-BLAST: high throughput BLAST based on Web services. Wang J; Mu Q Bioinformatics; 2003 Sep; 19(14):1863-4. PubMed ID: 14512365 [TBL] [Abstract][Full Text] [Related]
55. MSDash: mass spectrometry database and search. Wu Z; Lajoie G; Ma B Comput Syst Bioinformatics Conf; 2008; 7():63-71. PubMed ID: 19642269 [TBL] [Abstract][Full Text] [Related]
56. GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known protein three-dimensional structures. Yabuki Y; Mukai Y; Swindells MB; Suwa M Bioinformatics; 2004 Mar; 20(4):596-8. PubMed ID: 14751990 [TBL] [Abstract][Full Text] [Related]
57. Data mining of sequences and 3D structures of allergenic proteins. Ivanciuc O; Schein CH; Braun W Bioinformatics; 2002 Oct; 18(10):1358-64. PubMed ID: 12376380 [TBL] [Abstract][Full Text] [Related]
58. Constructing and refining multiple sequence alignments with PileUp, SeqLab, and the GCG suite. Thompson SM Curr Protoc Bioinformatics; 2003 Feb; Chapter 3():Unit 3.6. PubMed ID: 18428698 [TBL] [Abstract][Full Text] [Related]