These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. The limits of protein sequence comparison? Pearson WR; Sierk ML Curr Opin Struct Biol; 2005 Jun; 15(3):254-60. PubMed ID: 15919194 [TBL] [Abstract][Full Text] [Related]
4. Protein refinement: a new challenge for CASP in its 10th anniversary. Valencia A Bioinformatics; 2005 Feb; 21(3):277. PubMed ID: 15647301 [No Abstract] [Full Text] [Related]
5. Quantitative analysis of proteomics using data mining. An automated system for constructing assays quickly and precisely. Yen CY; Helmke SM; Cios KJ; Perryman MB; Duncan MW IEEE Eng Med Biol Mag; 2005; 24(3):67-72. PubMed ID: 15971843 [No Abstract] [Full Text] [Related]
6. Protein function from sequence and structure data. Domingues FS; Lengauer T Appl Bioinformatics; 2003; 2(1):3-12. PubMed ID: 15130830 [TBL] [Abstract][Full Text] [Related]
7. pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry. Li D; Fu Y; Sun R; Ling CX; Wei Y; Zhou H; Zeng R; Yang Q; He S; Gao W Bioinformatics; 2005 Jul; 21(13):3049-50. PubMed ID: 15817687 [TBL] [Abstract][Full Text] [Related]
8. MagicMatch--cross-referencing sequence identifiers across databases. Smith M; Kunin V; Goldovsky L; Enright AJ; Ouzounis CA Bioinformatics; 2005 Aug; 21(16):3429-30. PubMed ID: 15961438 [TBL] [Abstract][Full Text] [Related]
10. A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences. Othman RM; Deris S; Illias RM J Biomed Inform; 2008 Feb; 41(1):65-81. PubMed ID: 17681495 [TBL] [Abstract][Full Text] [Related]
11. SABmark--a benchmark for sequence alignment that covers the entire known fold space. Van Walle I; Lasters I; Wyns L Bioinformatics; 2005 Apr; 21(7):1267-8. PubMed ID: 15333456 [TBL] [Abstract][Full Text] [Related]
12. Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book. Sadygov RG; Cociorva D; Yates JR Nat Methods; 2004 Dec; 1(3):195-202. PubMed ID: 15789030 [TBL] [Abstract][Full Text] [Related]
14. FORTE: a profile-profile comparison tool for protein fold recognition. Tomii K; Akiyama Y Bioinformatics; 2004 Mar; 20(4):594-5. PubMed ID: 14764565 [TBL] [Abstract][Full Text] [Related]
15. Predicting secondary structures of proteins. Recognizing properties of amino acids with the logical analysis of data algorithm. Błazewicz J; Hammer PL; Lukasiak P IEEE Eng Med Biol Mag; 2005; 24(3):88-94. PubMed ID: 15971846 [No Abstract] [Full Text] [Related]
16. A web-based three-dimensional protein retrieval system by matching visual similarity. Yeh JS; Chen DY; Chen BY; Ouhyoung M Bioinformatics; 2005 Jul; 21(13):3056-7. PubMed ID: 15840701 [TBL] [Abstract][Full Text] [Related]
17. Towards index-based similarity search for protein structure databases. Camoğlu O; Kahveci T; Singh AK Proc IEEE Comput Soc Bioinform Conf; 2003; 2():148-58. PubMed ID: 16452789 [TBL] [Abstract][Full Text] [Related]
18. DOMAC: an accurate, hybrid protein domain prediction server. Cheng J Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W354-6. PubMed ID: 17553833 [TBL] [Abstract][Full Text] [Related]
19. Prediction of human protein function according to Gene Ontology categories. Jensen LJ; Gupta R; Staerfeldt HH; Brunak S Bioinformatics; 2003 Mar; 19(5):635-42. PubMed ID: 12651722 [TBL] [Abstract][Full Text] [Related]
20. Pairwise protein structure alignment based on an orientation-independent backbone representation. Ye J; Janardan R; Liu S J Bioinform Comput Biol; 2004 Dec; 2(4):699-717. PubMed ID: 15617162 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]