309 related articles for article (PubMed ID: 15980530)
1. YASS: enhancing the sensitivity of DNA similarity search.
Noé L; Kucherov G
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W540-3. PubMed ID: 15980530
[TBL] [Abstract][Full Text] [Related]
2. Improved hit criteria for DNA local alignment.
Noé L; Kucherov G
BMC Bioinformatics; 2004 Oct; 5():149. PubMed ID: 15485572
[TBL] [Abstract][Full Text] [Related]
3. GenAlyzer: interactive visualization of sequence similarities between entire genomes.
Choudhuri JV; Schleiermacher C; Kurtz S; Giegerich R
Bioinformatics; 2004 Aug; 20(12):1964-5. PubMed ID: 14988113
[TBL] [Abstract][Full Text] [Related]
4. Phylo-VISTA: interactive visualization of multiple DNA sequence alignments.
Shah N; Couronne O; Pennacchio LA; Brudno M; Batzoglou S; Bethel EW; Rubin EM; Hamann B; Dubchak I
Bioinformatics; 2004 Mar; 20(5):636-43. PubMed ID: 15033870
[TBL] [Abstract][Full Text] [Related]
5. GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.
Castrignanò T; De Meo PD; Grillo G; Liuni S; Mignone F; Talamo IG; Pesole G
Bioinformatics; 2006 Feb; 22(4):497-9. PubMed ID: 16267081
[TBL] [Abstract][Full Text] [Related]
6. ACGT-a comparative genomics tool.
Xie T; Hood L
Bioinformatics; 2003 May; 19(8):1039-40. PubMed ID: 12761070
[TBL] [Abstract][Full Text] [Related]
7. MultiPipMaker: comparative alignment server for multiple DNA sequences.
Elnitski L; Riemer C; Burhans R; Hardison R; Miller W
Curr Protoc Bioinformatics; 2005 Apr; Chapter 10():Unit10.4. PubMed ID: 18428743
[TBL] [Abstract][Full Text] [Related]
8. SeqVis: visualization of compositional heterogeneity in large alignments of nucleotides.
Ho JW; Adams CE; Lew JB; Matthews TJ; Ng CC; Shahabi-Sirjani A; Tan LH; Zhao Y; Easteal S; Wilson SR; Jermiin LS
Bioinformatics; 2006 Sep; 22(17):2162-3. PubMed ID: 16766557
[TBL] [Abstract][Full Text] [Related]
9. Visual representation of database search results: the RHIMS Plot.
Martin DM; Hill P; Barton GJ; Flavell AJ
Bioinformatics; 2003 May; 19(8):1037-8. PubMed ID: 12761069
[TBL] [Abstract][Full Text] [Related]
10. Multiple alignment of genomic sequences using CHAOS, DIALIGN and ABC.
Pöhler D; Werner N; Steinkamp R; Morgenstern B
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W532-4. PubMed ID: 15980528
[TBL] [Abstract][Full Text] [Related]
11. Installing and configuring CMap.
Faga B
Curr Protoc Bioinformatics; 2007 Mar; Chapter 9():Unit 9.8. PubMed ID: 18428796
[TBL] [Abstract][Full Text] [Related]
12. FeatureScan: revealing property-dependent similarity of nucleotide sequences.
Deyneko IV; Bredohl B; Wesely D; Kalybaeva YM; Kel AE; Blöcker H; Kauer G
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W591-5. PubMed ID: 16845077
[TBL] [Abstract][Full Text] [Related]
13. Deltarho-web, an online tool to assess composition similarity of individual nucleic acid sequences.
van Passel MW; Luyf AC; van Kampen AH; Bart A; van der Ende A
Bioinformatics; 2005 Jul; 21(13):3053-5. PubMed ID: 15855249
[TBL] [Abstract][Full Text] [Related]
14. Gene Unscrambler for detangling scrambled genes in ciliates.
Cavalcanti AR; Landweber LF
Bioinformatics; 2004 Mar; 20(5):800-2. PubMed ID: 14751966
[TBL] [Abstract][Full Text] [Related]
15. Rapid and sensitive dot-matrix methods for genome analysis.
Huang Y; Zhang L
Bioinformatics; 2004 Mar; 20(4):460-6. PubMed ID: 14764561
[TBL] [Abstract][Full Text] [Related]
16. BOV--a web-based BLAST output visualization tool.
Gollapudi R; Revanna KV; Hemmerich C; Schaack S; Dong Q
BMC Genomics; 2008 Sep; 9():414. PubMed ID: 18793422
[TBL] [Abstract][Full Text] [Related]
17. The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search.
Havgaard JH; Lyngsø RB; Gorodkin J
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W650-3. PubMed ID: 15980555
[TBL] [Abstract][Full Text] [Related]
18. PLAST-ncRNA: Partition function Local Alignment Search Tool for non-coding RNA sequences.
Chikkagoudar S; Livesay DR; Roshan U
Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W59-63. PubMed ID: 20522510
[TBL] [Abstract][Full Text] [Related]
19. COMPAM :visualization of combining pairwise alignments for multiple genomes.
Lee D; Choi JH; Dalkilic MM; Kim S
Bioinformatics; 2006 Jan; 22(2):242-4. PubMed ID: 16269416
[TBL] [Abstract][Full Text] [Related]
20. SynBrowse: a synteny browser for comparative sequence analysis.
Pan X; Stein L; Brendel V
Bioinformatics; 2005 Sep; 21(17):3461-8. PubMed ID: 15994196
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
