These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Simple and fast alignment of metabolic pathways by exploiting local diversity. Wernicke S; Rasche F Bioinformatics; 2007 Aug; 23(15):1978-85. PubMed ID: 17540683 [TBL] [Abstract][Full Text] [Related]
3. Deriving phylogenetic trees from the similarity analysis of metabolic pathways. Heymans M; Singh AK Bioinformatics; 2003; 19 Suppl 1():i138-46. PubMed ID: 12855450 [TBL] [Abstract][Full Text] [Related]
4. Observing local and global properties of metabolic pathways: 'load points' and 'choke points' in the metabolic networks. Rahman SA; Schomburg D Bioinformatics; 2006 Jul; 22(14):1767-74. PubMed ID: 16682421 [TBL] [Abstract][Full Text] [Related]
5. Pathway discovery in metabolic networks by subgraph extraction. Faust K; Dupont P; Callut J; van Helden J Bioinformatics; 2010 May; 26(9):1211-8. PubMed ID: 20228128 [TBL] [Abstract][Full Text] [Related]
6. SAGA: a subgraph matching tool for biological graphs. Tian Y; McEachin RC; Santos C; States DJ; Patel JM Bioinformatics; 2007 Jan; 23(2):232-9. PubMed ID: 17110368 [TBL] [Abstract][Full Text] [Related]
7. An algorithm for linear metabolic pathway alignment. Chen M; Hofestaedt R In Silico Biol; 2005; 5(2):111-28. PubMed ID: 15972016 [TBL] [Abstract][Full Text] [Related]
8. Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC). Rahman SA; Advani P; Schunk R; Schrader R; Schomburg D Bioinformatics; 2005 Apr; 21(7):1189-93. PubMed ID: 15572476 [TBL] [Abstract][Full Text] [Related]
15. Exploring the diversity of complex metabolic networks. Hatzimanikatis V; Li C; Ionita JA; Henry CS; Jankowski MD; Broadbelt LJ Bioinformatics; 2005 Apr; 21(8):1603-9. PubMed ID: 15613400 [TBL] [Abstract][Full Text] [Related]
16. Functional annotation of regulatory pathways. Pandey J; Koyutürk M; Kim Y; Szpankowski W; Subramaniam S; Grama A Bioinformatics; 2007 Jul; 23(13):i377-86. PubMed ID: 17646320 [TBL] [Abstract][Full Text] [Related]
17. BioMiner--modeling, analyzing, and visualizing biochemical pathways and networks. Sirava M; Schäfer T; Eiglsperger M; Kaufmann M; Kohlbacher O; Bornberg-Bauer E; Lenhof HP Bioinformatics; 2002; 18 Suppl 2():S219-30. PubMed ID: 12386006 [TBL] [Abstract][Full Text] [Related]
18. Reconstruction of phylogenetic relationships from metabolic pathways based on the enzyme hierarchy and the gene ontology. Clemente JC; Satou K; Valiente G Genome Inform; 2005; 16(2):45-55. PubMed ID: 16901088 [TBL] [Abstract][Full Text] [Related]
19. Fundamental Escherichia coli biochemical pathways for biomass and energy production: identification of reactions. Carlson R; Srienc F Biotechnol Bioeng; 2004 Jan; 85(1):1-19. PubMed ID: 14705007 [TBL] [Abstract][Full Text] [Related]
20. BioSilico: an integrated metabolic database system. Hou BK; Kim JS; Jun JH; Lee DY; Kim YW; Chae S; Roh M; In YH; Lee SY Bioinformatics; 2004 Nov; 20(17):3270-2. PubMed ID: 15201189 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]