These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 16046800)

  • 1. Data requirements for protein identification using chemically-assisted fragmentation and tandem mass spectrometry.
    Juhlin KD; Swift DD; Lacey MP; Correa PE; Keough TW
    Eur J Mass Spectrom (Chichester); 2005; 11(2):161-7. PubMed ID: 16046800
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Rapid identification of comigrating gel-isolated proteins by ion trap-mass spectrometry.
    Arnott D; Henzel WJ; Stults JT
    Electrophoresis; 1998 May; 19(6):968-80. PubMed ID: 9638943
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MSDash: mass spectrometry database and search.
    Wu Z; Lajoie G; Ma B
    Comput Syst Bioinformatics Conf; 2008; 7():63-71. PubMed ID: 19642269
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PepSplice: cache-efficient search algorithms for comprehensive identification of tandem mass spectra.
    Roos FF; Jacob R; Grossmann J; Fischer B; Buhmann JM; Gruissem W; Baginsky S; Widmayer P
    Bioinformatics; 2007 Nov; 23(22):3016-23. PubMed ID: 17768164
    [TBL] [Abstract][Full Text] [Related]  

  • 5. pFind 2.0: a software package for peptide and protein identification via tandem mass spectrometry.
    Wang LH; Li DQ; Fu Y; Wang HP; Zhang JF; Yuan ZF; Sun RX; Zeng R; He SM; Gao W
    Rapid Commun Mass Spectrom; 2007; 21(18):2985-91. PubMed ID: 17702057
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Probability-based pattern recognition and statistical framework for randomization: modeling tandem mass spectrum/peptide sequence false match frequencies.
    Feng J; Naiman DQ; Cooper B
    Bioinformatics; 2007 Sep; 23(17):2210-7. PubMed ID: 17510167
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Data pre-processing in liquid chromatography-mass spectrometry-based proteomics.
    Zhang X; Asara JM; Adamec J; Ouzzani M; Elmagarmid AK
    Bioinformatics; 2005 Nov; 21(21):4054-9. PubMed ID: 16150809
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Validation of tandem mass spectrometry database search results using DTASelect.
    Cociorva D; L Tabb D; Yates JR
    Curr Protoc Bioinformatics; 2007 Jan; Chapter 13():Unit 13.4. PubMed ID: 18428785
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Using the Proteomics Identifications Database (PRIDE).
    Martens L; Jones P; Côté R
    Curr Protoc Bioinformatics; 2008 Mar; Chapter 13():Unit 13.8. PubMed ID: 18428683
    [TBL] [Abstract][Full Text] [Related]  

  • 10. pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry.
    Li D; Fu Y; Sun R; Ling CX; Wei Y; Zhou H; Zeng R; Yang Q; He S; Gao W
    Bioinformatics; 2005 Jul; 21(13):3049-50. PubMed ID: 15817687
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Phosphoproteomics by mass spectrometry and classical protein chemistry approaches.
    Salih E
    Mass Spectrom Rev; 2005; 24(6):828-46. PubMed ID: 15538747
    [TBL] [Abstract][Full Text] [Related]  

  • 12. swissPIT: a novel approach for pipelined analysis of mass spectrometry data.
    Quandt A; Hernandez P; Masselot A; Hernandez C; Maffioletti S; Pautasso C; Appel RD; Lisacek F
    Bioinformatics; 2008 Jun; 24(11):1416-7. PubMed ID: 18436540
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A suffix tree approach to the interpretation of tandem mass spectra: applications to peptides of non-specific digestion and post-translational modifications.
    Lu B; Chen T
    Bioinformatics; 2003 Oct; 19 Suppl 2():ii113-21. PubMed ID: 14534180
    [TBL] [Abstract][Full Text] [Related]  

  • 14. An iterative algorithm to quantify factors influencing peptide fragmentation during tandem mass spectrometry.
    Yu C; Lin Y; Sun S; Cai J; Zhang J; Bu D; Zhang Z; Chen R
    J Bioinform Comput Biol; 2007 Apr; 5(2a):297-311. PubMed ID: 17589963
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Finding protein sequences using PROWL.
    Beavis R; Fenyö D
    Curr Protoc Bioinformatics; 2004 Oct; Chapter 13():Unit 13.2. PubMed ID: 18428719
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Valid data from large-scale proteomics studies.
    Chamrad D; Meyer HE
    Nat Methods; 2005 Sep; 2(9):647-8. PubMed ID: 16118632
    [No Abstract]   [Full Text] [Related]  

  • 17. Algorithm for peptide sequencing by tandem mass spectrometry based on better preprocessing and anti-symmetric computational model.
    Ning K; Leong HW
    Comput Syst Bioinformatics Conf; 2007; 6():19-30. PubMed ID: 17951809
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Automatic quality assessment of peptide tandem mass spectra.
    Bern M; Goldberg D; McDonald WH; Yates JR
    Bioinformatics; 2004 Aug; 20 Suppl 1():i49-54. PubMed ID: 15262780
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Using cross-correlation normalized for peptide length to optimize peptide identification in shotgun proteomics.
    Yang B; Ying W; Gong Y; Zhang Y; Cai Y; Dong H; Qian X
    Rapid Commun Mass Spectrom; 2005; 19(20):2983-5. PubMed ID: 16178048
    [No Abstract]   [Full Text] [Related]  

  • 20. A predictive model for identifying proteins by a single peptide match.
    Higdon R; Kolker E
    Bioinformatics; 2007 Feb; 23(3):277-80. PubMed ID: 17121779
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.