BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

95 related articles for article (PubMed ID: 16060688)

  • 1. The most deviated codon position in AT-rich bacterial genomes: a function related analysis.
    Ma BG; Chen LL
    J Biomol Struct Dyn; 2005 Oct; 23(2):143-9. PubMed ID: 16060688
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Compositional correlation studies among the three different codon positions in 12 bacterial genomes.
    Majumdar S; Gupta SK; Sundararajan VS; Ghosh TC
    Biochem Biophys Res Commun; 1999 Dec; 266(1):66-71. PubMed ID: 10581166
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The mystery of two straight lines in bacterial genome statistics.
    Gorban AN; Zinovyev AY
    Bull Math Biol; 2007 Oct; 69(7):2429-42. PubMed ID: 17577600
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes.
    Wan XF; Xu D; Kleinhofs A; Zhou J
    BMC Evol Biol; 2004 Jun; 4():19. PubMed ID: 15222899
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Organisms can essentially be classified according to two codon patterns.
    Okayasu T; Sorimachi K
    Amino Acids; 2009 Feb; 36(2):261-71. PubMed ID: 18379857
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Constraint on di-nucleotides by codon usage bias in bacterial genomes.
    Satapathy SS; Powdel BR; Dutta M; Buragohain AK; Ray SK
    Gene; 2014 Feb; 536(1):18-28. PubMed ID: 24333347
    [TBL] [Abstract][Full Text] [Related]  

  • 7. On the origin of three base periodicity in genomes.
    Shah K; Krishnamachari A
    Biosystems; 2012 Mar; 107(3):142-4. PubMed ID: 22100873
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A novel common triplet profile for GC-rich prokaryotic genomes.
    Zhang SH; Wang L
    Genomics; 2011 May; 97(5):330-1. PubMed ID: 21324351
    [No Abstract]   [Full Text] [Related]  

  • 9. Codon bias signatures, organization of microorganisms in codon space, and lifestyle.
    Carbone A; Képès F; Zinovyev A
    Mol Biol Evol; 2005 Mar; 22(3):547-61. PubMed ID: 15537809
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Seven GC-rich microbial genomes adopt similar codon usage patterns regardless of their phylogenetic lineages.
    Chen LL; Zhang CT
    Biochem Biophys Res Commun; 2003 Jun; 306(1):310-7. PubMed ID: 12788106
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CodonO: codon usage bias analysis within and across genomes.
    Angellotti MC; Bhuiyan SB; Chen G; Wan XF
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W132-6. PubMed ID: 17537810
    [TBL] [Abstract][Full Text] [Related]  

  • 12. GC content-independent amino acid patterns in bacteria and archaea.
    Schmidt A; Rzanny M; Schmidt A; Hagen M; Schütze E; Kothe E
    J Basic Microbiol; 2012 Apr; 52(2):195-205. PubMed ID: 21780150
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Compositional dynamics of guanine and cytosine content in prokaryotic genomes.
    Hu J; Zhao X; Zhang Z; Yu J
    Res Microbiol; 2007 May; 158(4):363-70. PubMed ID: 17449227
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparison of responses by bacteriophages and bacteria to pressures on the base composition of open reading frames.
    Mortimer JR; Forsdyke DR
    Appl Bioinformatics; 2003; 2(1):47-62. PubMed ID: 15130833
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Robust determinants of thermostability highlighted by a codon frequency index capable of discriminating thermophilic from mesophilic genomes.
    Montanucci L; Martelli PL; Fariselli P; Casadio R
    J Proteome Res; 2007 Jul; 6(7):2502-8. PubMed ID: 17530792
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Codon usage between genomes is constrained by genome-wide mutational processes.
    Chen SL; Lee W; Hottes AK; Shapiro L; McAdams HH
    Proc Natl Acad Sci U S A; 2004 Mar; 101(10):3480-5. PubMed ID: 14990797
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A combination dimensionality reduction approach to codon position patterns of eubacteria based on their complete genomes.
    Qi ZH; Wei RY
    J Theor Biol; 2011 Mar; 272(1):26-34. PubMed ID: 21163267
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Analysis of the relationship between genomic GC Content and patterns of base usage, codon usage and amino acid usage in prokaryotes: similar GC content adopts similar compositional frequencies regardless of the phylogenetic lineages.
    Zhou HQ; Ning LW; Zhang HX; Guo FB
    PLoS One; 2014; 9(9):e107319. PubMed ID: 25255224
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of the codon usage pattern in the Vibrio cholerae genome.
    Wang J; Zhang CT
    J Biomol Struct Dyn; 2001 Jun; 18(6):872-80. PubMed ID: 11444375
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cytosine usage modulates the correlation between CDS length and CG content in prokaryotic genomes.
    Xia X; Wang H; Xie Z; Carullo M; Huang H; Hickey D
    Mol Biol Evol; 2006 Jul; 23(7):1450-4. PubMed ID: 16687416
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.