These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

138 related articles for article (PubMed ID: 16086854)

  • 1. Genome-wide promoter extraction and analysis in human, mouse, and rat.
    Xuan Z; Zhao F; Wang J; Chen G; Zhang MQ
    Genome Biol; 2005; 6(8):R72. PubMed ID: 16086854
    [TBL] [Abstract][Full Text] [Related]  

  • 2. angaGEDUCI: Anopheles gambiae gene expression database with integrated comparative algorithms for identifying conserved DNA motifs in promoter sequences.
    Dissanayake SN; Marinotti O; Ribeiro JM; James AA
    BMC Genomics; 2006 May; 7():116. PubMed ID: 16707020
    [TBL] [Abstract][Full Text] [Related]  

  • 3. HumanUpstream and MouseUpstream: databases of promoter sequences in the human and mouse genomes.
    Leykin I; Kao MC; Wong WH
    OMICS; 2005; 9(3):220-4. PubMed ID: 16209636
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SCS: signal, context, and structure features for genome-wide human promoter recognition.
    Zeng J; Zhao XY; Cao XQ; Yan H
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(3):550-62. PubMed ID: 20671324
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Identification of promoter regions in the human genome by using a retroviral plasmid library-based functional reporter gene assay.
    Khambata-Ford S; Liu Y; Gleason C; Dickson M; Altman RB; Batzoglou S; Myers RM
    Genome Res; 2003 Jul; 13(7):1765-74. PubMed ID: 12805274
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Features and trend of loss of promoter-associated CpG islands in the human and mouse genomes.
    Jiang C; Han L; Su B; Li WH; Zhao Z
    Mol Biol Evol; 2007 Sep; 24(9):1991-2000. PubMed ID: 17591602
    [TBL] [Abstract][Full Text] [Related]  

  • 7. CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis.
    Kawaji H; Kasukawa T; Fukuda S; Katayama S; Kai C; Kawai J; Carninci P; Hayashizaki Y
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D632-6. PubMed ID: 16381948
    [TBL] [Abstract][Full Text] [Related]  

  • 8. MPromDb: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-chip experimental data.
    Sun H; Palaniswamy SK; Pohar TT; Jin VX; Huang TH; Davuluri RV
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D98-103. PubMed ID: 16381984
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A hybrid neural network system for prediction and recognition of promoter regions in human genome.
    Chen CB; Li T
    J Zhejiang Univ Sci B; 2005 May; 6(5):401-7. PubMed ID: 15822155
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The properties of CpG islands in the putative promoter regions of human immunoglobulin (Ig) genes.
    Liu GB; Yan H; Jiang YF; Chen R; Pettigrew JD; Zhao KN
    Gene; 2005 Sep; 358():127-38. PubMed ID: 16112518
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TRED: a Transcriptional Regulatory Element Database and a platform for in silico gene regulation studies.
    Zhao F; Xuan Z; Liu L; Zhang MQ
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D103-7. PubMed ID: 15608156
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome-wide proximal promoter analysis and interpretation.
    Guruceaga E; Segura V; Corrales FJ; Rubio A
    Methods Mol Biol; 2010; 593():157-74. PubMed ID: 19957149
    [TBL] [Abstract][Full Text] [Related]  

  • 13. [X]uniqMAP: unique gene sequence regions in the human and mouse genomes.
    Jiménez JL; Durbin R
    BMC Genomics; 2006 Oct; 7():249. PubMed ID: 17026744
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The UCSC genome browser database: update 2007.
    Kuhn RM; Karolchik D; Zweig AS; Trumbower H; Thomas DJ; Thakkapallayil A; Sugnet CW; Stanke M; Smith KE; Siepel A; Rosenbloom KR; Rhead B; Raney BJ; Pohl A; Pedersen JS; Hsu F; Hinrichs AS; Harte RA; Diekhans M; Clawson H; Bejerano G; Barber GP; Baertsch R; Haussler D; Kent WJ
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D668-73. PubMed ID: 17142222
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Inference of transcriptional regulation using gene expression data from the bovine and human genomes.
    Zadissa A; McEwan JC; Brown CM
    BMC Genomics; 2007 Aug; 8():265. PubMed ID: 17683551
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparison of gene coverage of mouse oligonucleotide microarray platforms.
    Verdugo RA; Medrano JF
    BMC Genomics; 2006 Mar; 7():58. PubMed ID: 16551360
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-wide analysis of factors regulating gene expression in liver.
    Teufel A; Weinmann A; Krupp M; Budinger M; Galle PR
    Gene; 2007 Mar; 389(2):114-21. PubMed ID: 17174484
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A promoter-level mammalian expression atlas.
    ; Forrest AR; Kawaji H; Rehli M; Baillie JK; de Hoon MJ; Haberle V; Lassmann T; Kulakovskiy IV; Lizio M; Itoh M; Andersson R; Mungall CJ; Meehan TF; Schmeier S; Bertin N; Jørgensen M; Dimont E; Arner E; Schmidl C; Schaefer U; Medvedeva YA; Plessy C; Vitezic M; Severin J; Semple C; Ishizu Y; Young RS; Francescatto M; Alam I; Albanese D; Altschuler GM; Arakawa T; Archer JA; Arner P; Babina M; Rennie S; Balwierz PJ; Beckhouse AG; Pradhan-Bhatt S; Blake JA; Blumenthal A; Bodega B; Bonetti A; Briggs J; Brombacher F; Burroughs AM; Califano A; Cannistraci CV; Carbajo D; Chen Y; Chierici M; Ciani Y; Clevers HC; Dalla E; Davis CA; Detmar M; Diehl AD; Dohi T; Drabløs F; Edge AS; Edinger M; Ekwall K; Endoh M; Enomoto H; Fagiolini M; Fairbairn L; Fang H; Farach-Carson MC; Faulkner GJ; Favorov AV; Fisher ME; Frith MC; Fujita R; Fukuda S; Furlanello C; Furino M; Furusawa J; Geijtenbeek TB; Gibson AP; Gingeras T; Goldowitz D; Gough J; Guhl S; Guler R; Gustincich S; Ha TJ; Hamaguchi M; Hara M; Harbers M; Harshbarger J; Hasegawa A; Hasegawa Y; Hashimoto T; Herlyn M; Hitchens KJ; Ho Sui SJ; Hofmann OM; Hoof I; Hori F; Huminiecki L; Iida K; Ikawa T; Jankovic BR; Jia H; Joshi A; Jurman G; Kaczkowski B; Kai C; Kaida K; Kaiho A; Kajiyama K; Kanamori-Katayama M; Kasianov AS; Kasukawa T; Katayama S; Kato S; Kawaguchi S; Kawamoto H; Kawamura YI; Kawashima T; Kempfle JS; Kenna TJ; Kere J; Khachigian LM; Kitamura T; Klinken SP; Knox AJ; Kojima M; Kojima S; Kondo N; Koseki H; Koyasu S; Krampitz S; Kubosaki A; Kwon AT; Laros JF; Lee W; Lennartsson A; Li K; Lilje B; Lipovich L; Mackay-Sim A; Manabe R; Mar JC; Marchand B; Mathelier A; Mejhert N; Meynert A; Mizuno Y; de Lima Morais DA; Morikawa H; Morimoto M; Moro K; Motakis E; Motohashi H; Mummery CL; Murata M; Nagao-Sato S; Nakachi Y; Nakahara F; Nakamura T; Nakamura Y; Nakazato K; van Nimwegen E; Ninomiya N; Nishiyori H; Noma S; Noma S; Noazaki T; Ogishima S; Ohkura N; Ohimiya H; Ohno H; Ohshima M; Okada-Hatakeyama M; Okazaki Y; Orlando V; Ovchinnikov DA; Pain A; Passier R; Patrikakis M; Persson H; Piazza S; Prendergast JG; Rackham OJ; Ramilowski JA; Rashid M; Ravasi T; Rizzu P; Roncador M; Roy S; Rye MB; Saijyo E; Sajantila A; Saka A; Sakaguchi S; Sakai M; Sato H; Savvi S; Saxena A; Schneider C; Schultes EA; Schulze-Tanzil GG; Schwegmann A; Sengstag T; Sheng G; Shimoji H; Shimoni Y; Shin JW; Simon C; Sugiyama D; Sugiyama T; Suzuki M; Suzuki N; Swoboda RK; 't Hoen PA; Tagami M; Takahashi N; Takai J; Tanaka H; Tatsukawa H; Tatum Z; Thompson M; Toyodo H; Toyoda T; Valen E; van de Wetering M; van den Berg LM; Verado R; Vijayan D; Vorontsov IE; Wasserman WW; Watanabe S; Wells CA; Winteringham LN; Wolvetang E; Wood EJ; Yamaguchi Y; Yamamoto M; Yoneda M; Yonekura Y; Yoshida S; Zabierowski SE; Zhang PG; Zhao X; Zucchelli S; Summers KM; Suzuki H; Daub CO; Kawai J; Heutink P; Hide W; Freeman TC; Lenhard B; Bajic VB; Taylor MS; Makeev VJ; Sandelin A; Hume DA; Carninci P; Hayashizaki Y
    Nature; 2014 Mar; 507(7493):462-70. PubMed ID: 24670764
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome‑wide analysis of DNA methylation in rat lungs with lipopolysaccharide‑induced acute lung injury.
    Zhang XQ; Lv CJ; Liu XY; Hao D; Qin J; Tian HH; Li Y; Wang XZ
    Mol Med Rep; 2013 May; 7(5):1417-24. PubMed ID: 23546543
    [TBL] [Abstract][Full Text] [Related]  

  • 20. MILANO--custom annotation of microarray results using automatic literature searches.
    Rubinstein R; Simon I
    BMC Bioinformatics; 2005 Jan; 6():12. PubMed ID: 15661078
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.