349 related articles for article (PubMed ID: 16108083)
1. Profile-based string kernels for remote homology detection and motif extraction.
Kuang R; Ie E; Wang K; Wang K; Siddiqi M; Freund Y; Leslie C
J Bioinform Comput Biol; 2005 Jun; 3(3):527-50. PubMed ID: 16108083
[TBL] [Abstract][Full Text] [Related]
2. Profile-based string kernels for remote homology detection and motif extraction.
Kuang R; Ie E; Wang K; Wang K; Siddiqi M; Freund Y; Leslie C
Proc IEEE Comput Syst Bioinform Conf; 2004; ():152-60. PubMed ID: 16448009
[TBL] [Abstract][Full Text] [Related]
3. SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.
Melvin I; Ie E; Kuang R; Weston J; Stafford WN; Leslie C
BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S2. PubMed ID: 17570145
[TBL] [Abstract][Full Text] [Related]
4. Mismatch string kernels for discriminative protein classification.
Leslie CS; Eskin E; Cohen A; Weston J; Noble WS
Bioinformatics; 2004 Mar; 20(4):467-76. PubMed ID: 14990442
[TBL] [Abstract][Full Text] [Related]
5. Protein homology detection using string alignment kernels.
Saigo H; Vert JP; Ueda N; Akutsu T
Bioinformatics; 2004 Jul; 20(11):1682-9. PubMed ID: 14988126
[TBL] [Abstract][Full Text] [Related]
6. Support vector machines with profile-based kernels for remote protein homology detection.
Busuttil S; Abela J; Pace GJ
Genome Inform; 2004; 15(2):191-200. PubMed ID: 15706505
[TBL] [Abstract][Full Text] [Related]
7. Application of string kernels in protein sequence classification.
Zaki NM; Deris S; Illias R
Appl Bioinformatics; 2005; 4(1):45-52. PubMed ID: 16000012
[TBL] [Abstract][Full Text] [Related]
8. Application of latent semantic analysis to protein remote homology detection.
Dong QW; Wang XL; Lin L
Bioinformatics; 2006 Feb; 22(3):285-90. PubMed ID: 16317074
[TBL] [Abstract][Full Text] [Related]
9. SVM-HUSTLE--an iterative semi-supervised machine learning approach for pairwise protein remote homology detection.
Shah AR; Oehmen CS; Webb-Robertson BJ
Bioinformatics; 2008 Mar; 24(6):783-90. PubMed ID: 18245127
[TBL] [Abstract][Full Text] [Related]
10. Remote protein homology detection and fold recognition using two-layer support vector machine classifiers.
Muda HM; Saad P; Othman RM
Comput Biol Med; 2011 Aug; 41(8):687-99. PubMed ID: 21704312
[TBL] [Abstract][Full Text] [Related]
11. Probabilistic multi-class multi-kernel learning: on protein fold recognition and remote homology detection.
Damoulas T; Girolami MA
Bioinformatics; 2008 May; 24(10):1264-70. PubMed ID: 18378524
[TBL] [Abstract][Full Text] [Related]
12. Remote homology detection: a motif based approach.
Ben-Hur A; Brutlag D
Bioinformatics; 2003; 19 Suppl 1():i26-33. PubMed ID: 12855434
[TBL] [Abstract][Full Text] [Related]
13. A structural alignment kernel for protein structures.
Qiu J; Hue M; Ben-Hur A; Vert JP; Noble WS
Bioinformatics; 2007 May; 23(9):1090-8. PubMed ID: 17234638
[TBL] [Abstract][Full Text] [Related]
14. Motif extraction and protein classification.
Kunik V; Solan Z; Edelman S; Ruppin E; Horn D
Proc IEEE Comput Syst Bioinform Conf; 2005; ():80-5. PubMed ID: 16447965
[TBL] [Abstract][Full Text] [Related]
15. Profile-based direct kernels for remote homology detection and fold recognition.
Rangwala H; Karypis G
Bioinformatics; 2005 Dec; 21(23):4239-47. PubMed ID: 16188929
[TBL] [Abstract][Full Text] [Related]
16. Efficient remote homology detection using local structure.
Hou Y; Hsu W; Lee ML; Bystroff C
Bioinformatics; 2003 Nov; 19(17):2294-301. PubMed ID: 14630658
[TBL] [Abstract][Full Text] [Related]
17. Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection.
Liu B; Zhang D; Xu R; Xu J; Wang X; Chen Q; Dong Q; Chou KC
Bioinformatics; 2014 Feb; 30(4):472-9. PubMed ID: 24318998
[TBL] [Abstract][Full Text] [Related]
18. Semi-supervised protein classification using cluster kernels.
Weston J; Leslie C; Ie E; Zhou D; Elisseeff A; Noble WS
Bioinformatics; 2005 Aug; 21(15):3241-7. PubMed ID: 15905279
[TBL] [Abstract][Full Text] [Related]
19. The spectrum kernel: a string kernel for SVM protein classification.
Leslie C; Eskin E; Noble WS
Pac Symp Biocomput; 2002; ():564-75. PubMed ID: 11928508
[TBL] [Abstract][Full Text] [Related]
20. Learned random-walk kernels and empirical-map kernels for protein sequence classification.
Min R; Bonner A; Li J; Zhang Z
J Comput Biol; 2009 Mar; 16(3):457-74. PubMed ID: 19254184
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]