197 related articles for article (PubMed ID: 16144806)
1. Inference of transcriptional regulatory network by two-stage constrained space factor analysis.
Yu T; Li KC
Bioinformatics; 2005 Nov; 21(21):4033-8. PubMed ID: 16144806
[TBL] [Abstract][Full Text] [Related]
2. Generating Boolean networks with a prescribed attractor structure.
Pal R; Ivanov I; Datta A; Bittner ML; Dougherty ER
Bioinformatics; 2005 Nov; 21(21):4021-5. PubMed ID: 16150807
[TBL] [Abstract][Full Text] [Related]
3. Predicting genetic regulatory response using classification.
Middendorf M; Kundaje A; Wiggins C; Freund Y; Leslie C
Bioinformatics; 2004 Aug; 20 Suppl 1():i232-40. PubMed ID: 15262804
[TBL] [Abstract][Full Text] [Related]
4. Boolean dynamics of genetic regulatory networks inferred from microarray time series data.
Martin S; Zhang Z; Martino A; Faulon JL
Bioinformatics; 2007 Apr; 23(7):866-74. PubMed ID: 17267426
[TBL] [Abstract][Full Text] [Related]
5. Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.
Hirose O; Yoshida R; Imoto S; Yamaguchi R; Higuchi T; Charnock-Jones DS; Print C; Miyano S
Bioinformatics; 2008 Apr; 24(7):932-42. PubMed ID: 18292116
[TBL] [Abstract][Full Text] [Related]
6. Gene network inference from incomplete expression data: transcriptional control of hematopoietic commitment.
Missal K; Cross MA; Drasdo D
Bioinformatics; 2006 Mar; 22(6):731-8. PubMed ID: 16332705
[TBL] [Abstract][Full Text] [Related]
7. Transcriptome network component analysis with limited microarray data.
Galbraith SJ; Tran LM; Liao JC
Bioinformatics; 2006 Aug; 22(15):1886-94. PubMed ID: 16766556
[TBL] [Abstract][Full Text] [Related]
8. A Gibbs sampler for the identification of gene expression and network connectivity consistency.
Brynildsen MP; Tran LM; Liao JC
Bioinformatics; 2006 Dec; 22(24):3040-6. PubMed ID: 17060361
[TBL] [Abstract][Full Text] [Related]
9. Learning regulatory programs that accurately predict differential expression with MEDUSA.
Kundaje A; Lianoglou S; Li X; Quigley D; Arias M; Wiggins CH; Zhang L; Leslie C
Ann N Y Acad Sci; 2007 Dec; 1115():178-202. PubMed ID: 17934055
[TBL] [Abstract][Full Text] [Related]
10. Comparing association network algorithms for reverse engineering of large-scale gene regulatory networks: synthetic versus real data.
Soranzo N; Bianconi G; Altafini C
Bioinformatics; 2007 Jul; 23(13):1640-7. PubMed ID: 17485431
[TBL] [Abstract][Full Text] [Related]
11. Using a state-space model with hidden variables to infer transcription factor activities.
Li Z; Shaw SM; Yedwabnick MJ; Chan C
Bioinformatics; 2006 Mar; 22(6):747-54. PubMed ID: 16403793
[TBL] [Abstract][Full Text] [Related]
12. Inferring gene regulatory networks from multiple microarray datasets.
Wang Y; Joshi T; Zhang XS; Xu D; Chen L
Bioinformatics; 2006 Oct; 22(19):2413-20. PubMed ID: 16864593
[TBL] [Abstract][Full Text] [Related]
13. A causal inference approach for constructing transcriptional regulatory networks.
Xing B; van der Laan MJ
Bioinformatics; 2005 Nov; 21(21):4007-13. PubMed ID: 16131521
[TBL] [Abstract][Full Text] [Related]
14. Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method.
Fujita A; Sato JR; Garay-Malpartida HM; Morettin PA; Sogayar MC; Ferreira CE
Bioinformatics; 2007 Jul; 23(13):1623-30. PubMed ID: 17463021
[TBL] [Abstract][Full Text] [Related]
15. LICORN: learning cooperative regulation networks from gene expression data.
Elati M; Neuvial P; Bolotin-Fukuhara M; Barillot E; Radvanyi F; Rouveirol C
Bioinformatics; 2007 Sep; 23(18):2407-14. PubMed ID: 17720703
[TBL] [Abstract][Full Text] [Related]
16. Supervised inference of gene-regulatory networks.
To CC; Vohradsky J
BMC Bioinformatics; 2008 Jan; 9():2. PubMed ID: 18177495
[TBL] [Abstract][Full Text] [Related]
17. Advances to Bayesian network inference for generating causal networks from observational biological data.
Yu J; Smith VA; Wang PP; Hartemink AJ; Jarvis ED
Bioinformatics; 2004 Dec; 20(18):3594-603. PubMed ID: 15284094
[TBL] [Abstract][Full Text] [Related]
18. A stochastic differential equation model for quantifying transcriptional regulatory network in Saccharomyces cerevisiae.
Chen KC; Wang TY; Tseng HH; Huang CY; Kao CY
Bioinformatics; 2005 Jun; 21(12):2883-90. PubMed ID: 15802287
[TBL] [Abstract][Full Text] [Related]
19. Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks.
Werhli AV; Grzegorczyk M; Husmeier D
Bioinformatics; 2006 Oct; 22(20):2523-31. PubMed ID: 16844710
[TBL] [Abstract][Full Text] [Related]
20. Bayesian sparse hidden components analysis for transcription regulation networks.
Sabatti C; James GM
Bioinformatics; 2006 Mar; 22(6):739-46. PubMed ID: 16368767
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]