178 related articles for article (PubMed ID: 16174645)
1. Distribution of the strength of selection against amino acid replacements in human proteins.
Yampolsky LY; Kondrashov FA; Kondrashov AS
Hum Mol Genet; 2005 Nov; 14(21):3191-201. PubMed ID: 16174645
[TBL] [Abstract][Full Text] [Related]
2. Selective pressures at a codon-level predict deleterious mutations in human disease genes.
Arbiza L; Duchi S; Montaner D; Burguet J; Pantoja-Uceda D; Pineda-Lucena A; Dopazo J; Dopazo H
J Mol Biol; 2006 May; 358(5):1390-404. PubMed ID: 16584746
[TBL] [Abstract][Full Text] [Related]
3. Positive selection at sites of multiple amino acid replacements since rat-mouse divergence.
Bazykin GA; Kondrashov FA; Ogurtsov AY; Sunyaev S; Kondrashov AS
Nature; 2004 Jun; 429(6991):558-62. PubMed ID: 15175752
[TBL] [Abstract][Full Text] [Related]
4. Strength of the purifying selection against different categories of the point mutations in the coding regions of the human genome.
Gorlov IP; Kimmel M; Amos CI
Hum Mol Genet; 2006 Apr; 15(7):1143-50. PubMed ID: 16500998
[TBL] [Abstract][Full Text] [Related]
5. Phylogenetic network and physicochemical properties of nonsynonymous mutations in the protein-coding genes of human mitochondrial DNA.
Moilanen JS; Majamaa K
Mol Biol Evol; 2003 Aug; 20(8):1195-210. PubMed ID: 12777521
[TBL] [Abstract][Full Text] [Related]
6. Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information.
Capriotti E; Calabrese R; Casadio R
Bioinformatics; 2006 Nov; 22(22):2729-34. PubMed ID: 16895930
[TBL] [Abstract][Full Text] [Related]
7. Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites.
Kondrashov FA; Ogurtsov AY; Kondrashov AS
J Theor Biol; 2006 Jun; 240(4):616-26. PubMed ID: 16343547
[TBL] [Abstract][Full Text] [Related]
8. Missense mutations in transmembrane domains of proteins: phenotypic propensity of polar residues for human disease.
Partridge AW; Therien AG; Deber CM
Proteins; 2004 Mar; 54(4):648-56. PubMed ID: 14997561
[TBL] [Abstract][Full Text] [Related]
9. Insights from modeling protein evolution with context-dependent mutation and asymmetric amino acid selection.
Saunders CT; Green P
Mol Biol Evol; 2007 Dec; 24(12):2632-47. PubMed ID: 17906001
[TBL] [Abstract][Full Text] [Related]
10. How similar are amino acid mutations in human genetic diseases and evolution.
Wu H; Ma BG; Zhao JT; Zhang HY
Biochem Biophys Res Commun; 2007 Oct; 362(2):233-7. PubMed ID: 17681277
[TBL] [Abstract][Full Text] [Related]
11. Three-dimensional window analysis for detecting positive selection at structural regions of proteins.
Suzuki Y
Mol Biol Evol; 2004 Dec; 21(12):2352-9. PubMed ID: 15356273
[TBL] [Abstract][Full Text] [Related]
12. A universal trend of amino acid gain and loss in protein evolution.
Jordan IK; Kondrashov FA; Adzhubei IA; Wolf YI; Koonin EV; Kondrashov AS; Sunyaev S
Nature; 2005 Feb; 433(7026):633-8. PubMed ID: 15660107
[TBL] [Abstract][Full Text] [Related]
13. Evolutionary anatomies of positions and types of disease-associated and neutral amino acid mutations in the human genome.
Subramanian S; Kumar S
BMC Genomics; 2006 Dec; 7():306. PubMed ID: 17144929
[TBL] [Abstract][Full Text] [Related]
14. Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection.
Sawyer SA; Kulathinal RJ; Bustamante CD; Hartl DL
J Mol Evol; 2003; 57 Suppl 1():S154-64. PubMed ID: 15008412
[TBL] [Abstract][Full Text] [Related]
15. SNPs, protein structure, and disease.
Wang Z; Moult J
Hum Mutat; 2001 Apr; 17(4):263-70. PubMed ID: 11295823
[TBL] [Abstract][Full Text] [Related]
16. Prevalence of positive selection among nearly neutral amino acid replacements in Drosophila.
Sawyer SA; Parsch J; Zhang Z; Hartl DL
Proc Natl Acad Sci U S A; 2007 Apr; 104(16):6504-10. PubMed ID: 17409186
[TBL] [Abstract][Full Text] [Related]
17. Can RNA selection pressure distort the measurement of Ka/Ks?
Xing Y; Lee C
Gene; 2006 Mar; 370():1-5. PubMed ID: 16488091
[TBL] [Abstract][Full Text] [Related]
18. Evidence for convergent nucleotide evolution and high allelic turnover rates at the complementary sex determiner gene of Western and Asian honeybees.
Hasselmann M; Vekemans X; Pflugfelder J; Koeniger N; Koeniger G; Tingek S; Beye M
Mol Biol Evol; 2008 Apr; 25(4):696-708. PubMed ID: 18192695
[TBL] [Abstract][Full Text] [Related]
19. Radical amino acid change versus positive selection in the evolution of viral envelope proteins.
Hanada K; Gojobori T; Li WH
Gene; 2006 Dec; 385():83-8. PubMed ID: 17014971
[TBL] [Abstract][Full Text] [Related]
20. Evaluation of whether accelerated protein evolution in chordates has occurred before, after, or simultaneously with gene duplication.
Johnston CR; O'Dushlaine C; Fitzpatrick DA; Edwards RJ; Shields DC
Mol Biol Evol; 2007 Jan; 24(1):315-23. PubMed ID: 17065596
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
