117 related articles for article (PubMed ID: 16176267)
1. Structure, epitope mapping, and docking simulation of a gibberellin mimic peptide as a peptidyl mimotope for a hydrophobic ligand.
Murata T; Hemmi H; Nakamura S; Shimizu K; Suzuki Y; Yamaguchi I
FEBS J; 2005 Oct; 272(19):4938-48. PubMed ID: 16176267
[TBL] [Abstract][Full Text] [Related]
2. Epitope mapping of the phosphorylation motif of the HIV-1 protein Vpu bound to the selective monoclonal antibody using TRNOESY and STD NMR spectroscopy.
Gharbi-Benarous J; Bertho G; Evrard-Todeschi N; Coadou G; Megy S; Delaunay T; Benarous R; Girault JP
Biochemistry; 2004 Nov; 43(46):14555-65. PubMed ID: 15544326
[TBL] [Abstract][Full Text] [Related]
3. Small-molecule ligands of GD2 ganglioside, designed from NMR studies, exhibit induced-fit binding and bioactivity.
Tong W; Gagnon M; Sprules T; Gilbert M; Chowdhury S; Meerovitch K; Hansford K; Purisima EO; Blankenship JW; Cheung NK; Gehring K; Lubell WD; Saragovi HU
Chem Biol; 2010 Feb; 17(2):183-94. PubMed ID: 20189108
[TBL] [Abstract][Full Text] [Related]
4. Molecular modeling of cardiac glycoside binding by the human sequence monoclonal antibody 1B3.
Paula S; Monson N; Ball WJ
Proteins; 2005 Aug; 60(3):382-91. PubMed ID: 15971203
[TBL] [Abstract][Full Text] [Related]
5. NMR solution structure of a potent cyclic nonapeptide inhibitor of ICAM-1-mediated leukocyte adhesion produced by homologous amino acid substitution.
Sillerud LO; Burks EJ; Brown WM; Brown DC; Larson RS
J Pept Res; 2004 Oct; 64(4):127-40. PubMed ID: 15357668
[TBL] [Abstract][Full Text] [Related]
6. Investigation of the binding of a carbohydrate-mimetic peptide to its complementary anticarbohydrate antibody by STD-NMR spectroscopy and molecular-dynamics simulations.
Szczepina MG; Bleile DW; Pinto BM
Chemistry; 2011 Oct; 17(41):11446-55. PubMed ID: 21953925
[TBL] [Abstract][Full Text] [Related]
7. Transfer-NMR and docking studies identify the binding of the peptide derived from activating transcription factor 4 to protein ubiquitin ligase beta-TrCP. Competition STD-NMR with beta-catenin.
Pons J; Evrard-Todeschi N; Bertho G; Gharbi-Benarous J; Tanchou V; Benarous R; Girault JP
Biochemistry; 2008 Jan; 47(1):14-29. PubMed ID: 18052253
[TBL] [Abstract][Full Text] [Related]
8. Epitope mapping of gibberellin to the anti-gibberellin A(4) monoclonal antibody by saturation transfer difference NMR spectroscopy.
Murata T; Hemmi H; Nakajima M; Yoshida M; Yamaguchi I
Biochem Biophys Res Commun; 2003 Aug; 307(3):498-502. PubMed ID: 12893249
[TBL] [Abstract][Full Text] [Related]
9. Cyclic peptides selected by phage display mimic the natural epitope recognized by a monoclonal anti-colicin A antibody.
Coulon S; Metais JY; Chartier M; Briand JP; Baty D
J Pept Sci; 2004 Nov; 10(11):648-58. PubMed ID: 15568679
[TBL] [Abstract][Full Text] [Related]
10. NMR studies for identifying phosphopeptide ligands of the HIV-1 protein Vpu binding to the F-box protein beta-TrCP.
Evrard-Todeschi N; Gharbi-Benarous J; Bertho G; Coadou G; Megy S; Benarous R; Girault JP
Peptides; 2006 Jan; 27(1):194-210. PubMed ID: 16165251
[TBL] [Abstract][Full Text] [Related]
11. CORCEMA refinement of the bound ligand conformation within the protein binding pocket in reversibly forming weak complexes using STD-NMR intensities.
Jayalakshmi V; Rama Krishna N
J Magn Reson; 2004 May; 168(1):36-45. PubMed ID: 15082247
[TBL] [Abstract][Full Text] [Related]
12. Structure and orientation of peptide inhibitors bound to beta-amyloid fibrils.
Chen Z; Krause G; Reif B
J Mol Biol; 2005 Dec; 354(4):760-76. PubMed ID: 16271725
[TBL] [Abstract][Full Text] [Related]
13. Investigation of the stereoselectivity of an anti-amino acid antibody using molecular modeling and ligand docking.
Ranieri DI; Corgliano DM; Franco EJ; Hofstetter H; Hofstetter O
Chirality; 2008 Mar; 20(3-4):559-70. PubMed ID: 18172831
[TBL] [Abstract][Full Text] [Related]
14. Native-like cyclic peptide models of a viral antigenic site: finding a balance between rigidity and flexibility.
Valero ML; Camarero JA; Haack T; Mateu MG; Domingo E; Giralt E; Andreu D
J Mol Recognit; 2000; 13(1):5-13. PubMed ID: 10679891
[TBL] [Abstract][Full Text] [Related]
15. Synthesis and antibody recognition of cyclic epitope peptides, together with their dimer and conjugated derivatives based on residues 9-22 of herpes simplex virus type 1 glycoprotein D.
Jakab A; Schlosser G; Feijlbrief M; Welling-Wester S; Manea M; Vila-Perello M; Andreu D; Hudecz F; Mezo G
Bioconjug Chem; 2009 Apr; 20(4):683-92. PubMed ID: 19271736
[TBL] [Abstract][Full Text] [Related]
16. Crystal structure of the liganded anti-gibberellin A(4) antibody 4-B8(8)/E9 Fab fragment.
Murata T; Fushinobu S; Nakajima M; Asami O; Sassa T; Wakagi T; Yamaguchi I
Biochem Biophys Res Commun; 2002 Apr; 293(1):489-96. PubMed ID: 12054627
[TBL] [Abstract][Full Text] [Related]
17. Anti-metatype peptides, a molecular tool with high sensitivity and specificity to monitor small ligands.
Inaba J; Nakamura S; Shimizu K; Asami T; Suzuki Y
Anal Biochem; 2009 May; 388(1):63-70. PubMed ID: 19454218
[TBL] [Abstract][Full Text] [Related]
18. WaterLOGSY NMR experiments in conjunction with molecular-dynamics simulations identify immobilized water molecules that bridge peptide mimic MDWNMHAA to anticarbohydrate antibody SYA/J6.
Szczepina MG; Bleile DW; Müllegger J; Lewis AR; Pinto BM
Chemistry; 2011 Oct; 17(41):11438-45. PubMed ID: 21887835
[TBL] [Abstract][Full Text] [Related]
19. Epitope mapping of sialyl Lewis(x) bound to E-selectin using saturation transfer difference NMR experiments.
Rinnbauer M; Ernst B; Wagner B; Magnani J; Benie AJ; Peters T
Glycobiology; 2003 Jun; 13(6):435-43. PubMed ID: 12626392
[TBL] [Abstract][Full Text] [Related]
20. Rational dissection of binding surfaces for mimicking of discontinuous antigenic sites.
Villén J; Rodríguez-Mias RA; Núñez JI; Giralt E; Sobrino F; Andreu D
Chem Biol; 2006 Aug; 13(8):815-23. PubMed ID: 16931331
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]