118 related articles for article (PubMed ID: 16188276)
1. Reconstruction of ancient genome and gene order from complete microbial genome sequences.
Wang Y; Li W; Zhang T; Ding C; Lu Z; Long N; Rose JP; Wang BC; Lin D
J Theor Biol; 2006 Apr; 239(4):494-8. PubMed ID: 16188276
[TBL] [Abstract][Full Text] [Related]
2. Detecting gene clusters under evolutionary constraint in a large number of genomes.
Ling X; He X; Xin D
Bioinformatics; 2009 Mar; 25(5):571-7. PubMed ID: 19158161
[TBL] [Abstract][Full Text] [Related]
3. Persistence drives gene clustering in bacterial genomes.
Fang G; Rocha EP; Danchin A
BMC Genomics; 2008 Jan; 9():4. PubMed ID: 18179692
[TBL] [Abstract][Full Text] [Related]
4. A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm.
Podell S; Gaasterland T; Allen EE
BMC Bioinformatics; 2008 Oct; 9():419. PubMed ID: 18840280
[TBL] [Abstract][Full Text] [Related]
5. Ancestral animal genomes reconstruction.
Rascol VL; Pontarotti P; Levasseur A
Curr Opin Immunol; 2007 Oct; 19(5):542-6. PubMed ID: 17702562
[TBL] [Abstract][Full Text] [Related]
6. Computational approaches to unveiling ancient genome duplications.
Van de Peer Y
Nat Rev Genet; 2004 Oct; 5(10):752-63. PubMed ID: 15510166
[TBL] [Abstract][Full Text] [Related]
7. Inferring functional relationships from conservation of gene order.
Moreno-Hagelsieb G
Methods Mol Biol; 2008; 453():181-99. PubMed ID: 18712303
[TBL] [Abstract][Full Text] [Related]
8. Multiple genome alignment for identifying the core structure among moderately related microbial genomes.
Uchiyama I
BMC Genomics; 2008 Oct; 9():515. PubMed ID: 18976470
[TBL] [Abstract][Full Text] [Related]
9. Advances in phylogeny reconstruction from gene order and content data.
Moret BM; Warnow T
Methods Enzymol; 2005; 395():673-700. PubMed ID: 15865990
[TBL] [Abstract][Full Text] [Related]
10. Strategies for genome reduction in microbial genomes.
Sakharkar KR; Chow VT
Genome Inform; 2005; 16(2):69-75. PubMed ID: 16901090
[TBL] [Abstract][Full Text] [Related]
11. Inferring ancestral gene order.
Catchen JM; Conery JS; Postlethwait JH
Methods Mol Biol; 2008; 452():365-83. PubMed ID: 18566773
[TBL] [Abstract][Full Text] [Related]
12. A multi-approaches-guided genetic algorithm with application to operon prediction.
Wang S; Wang Y; Du W; Sun F; Wang X; Zhou C; Liang Y
Artif Intell Med; 2007 Oct; 41(2):151-9. PubMed ID: 17869072
[TBL] [Abstract][Full Text] [Related]
13. Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps.
Tang H; Wang X; Bowers JE; Ming R; Alam M; Paterson AH
Genome Res; 2008 Dec; 18(12):1944-54. PubMed ID: 18832442
[TBL] [Abstract][Full Text] [Related]
14. Ancient horizontal gene transfer can benefit phylogenetic reconstruction.
Huang J; Gogarten JP
Trends Genet; 2006 Jul; 22(7):361-6. PubMed ID: 16730850
[TBL] [Abstract][Full Text] [Related]
15. BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes.
Luo Y; Fu C; Zhang DY; Lin K
BMC Bioinformatics; 2007 Jul; 8():266. PubMed ID: 17650344
[TBL] [Abstract][Full Text] [Related]
16. Detecting lateral genetic transfer : a phylogenetic approach.
Beiko RG; Ragan MA
Methods Mol Biol; 2008; 452():457-69. PubMed ID: 18566777
[TBL] [Abstract][Full Text] [Related]
17. Prediction of functional modules based on gene distributions in microbial genomes.
Wu H; Mao F; Su Z; Olman V; Xu Y
Genome Inform; 2005; 16(2):247-59. PubMed ID: 16901107
[TBL] [Abstract][Full Text] [Related]
18. Complete nucleotide sequence of the mitochondrial genome of a Malagasy poison frog Mantella madagascariensis: evolutionary implications on mitochondrial genomes of higher anuran groups.
Kurabayashi A; Usuki C; Mikami N; Fujii T; Yonekawa H; Sumida M; Hasegawa M
Mol Phylogenet Evol; 2006 Apr; 39(1):223-36. PubMed ID: 16446106
[TBL] [Abstract][Full Text] [Related]
19. Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Positional conservation of clusters of overlapping promoter-like sequences in enterobacterial genomes.
Huerta AM; Collado-Vides J; Francino MP;
Mol Biol Evol; 2006 May; 23(5):997-1010. PubMed ID: 16547149
[TBL] [Abstract][Full Text] [Related]
20. Protein repertoire of double-stranded DNA bacteriophages.
Liu J; Glazko G; Mushegian A
Virus Res; 2006 Apr; 117(1):68-80. PubMed ID: 16490276
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]