566 related articles for article (PubMed ID: 16261196)
1. Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.
Rodionov DA; Dubchak IL; Arkin AP; Alm EJ; Gelfand MS
PLoS Comput Biol; 2005 Oct; 1(5):e55. PubMed ID: 16261196
[TBL] [Abstract][Full Text] [Related]
2. [Comparative genomics analysis of nitrate and nitrite respiration in gamma proteobacteria].
Ravcheev DA; Rakhmaninova AB; Mironov AA; Gel'fand MS
Mol Biol (Mosk); 2005; 39(5):832-46. PubMed ID: 16240717
[TBL] [Abstract][Full Text] [Related]
3. Expression of nitrite reductase in Nitrosomonas europaea involves NsrR, a novel nitrite-sensitive transcription repressor.
Beaumont HJ; Lens SI; Reijnders WN; Westerhoff HV; van Spanning RJ
Mol Microbiol; 2004 Oct; 54(1):148-58. PubMed ID: 15458412
[TBL] [Abstract][Full Text] [Related]
4. Nitric oxide signaling and NO dependent transcriptional control in bacterial denitrification by members of the FNR-CRP regulator family.
Zumft WG
J Mol Microbiol Biotechnol; 2002 May; 4(3):277-86. PubMed ID: 11931559
[TBL] [Abstract][Full Text] [Related]
5. Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach.
Ma HW; Buer J; Zeng AP
BMC Bioinformatics; 2004 Dec; 5():199. PubMed ID: 15603590
[TBL] [Abstract][Full Text] [Related]
6. Transcriptional regulation of a hybrid cluster (prismane) protein.
Filenko NA; Browning DF; Cole JA
Biochem Soc Trans; 2005 Feb; 33(Pt 1):195-7. PubMed ID: 15667305
[TBL] [Abstract][Full Text] [Related]
7. Genome-wide identification of binding sites for the nitric oxide-sensitive transcriptional regulator NsrR.
Efromovich S; Grainger D; Bodenmiller D; Spiro S
Methods Enzymol; 2008; 437():211-33. PubMed ID: 18433631
[TBL] [Abstract][Full Text] [Related]
8. The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic, respiratory nitrite reductase.
Filenko N; Spiro S; Browning DF; Squire D; Overton TW; Cole J; Constantinidou C
J Bacteriol; 2007 Jun; 189(12):4410-7. PubMed ID: 17449618
[TBL] [Abstract][Full Text] [Related]
9. Bacterial regulatory networks are extremely flexible in evolution.
Lozada-Chávez I; Janga SC; Collado-Vides J
Nucleic Acids Res; 2006; 34(12):3434-45. PubMed ID: 16840530
[TBL] [Abstract][Full Text] [Related]
10. Coordinated regulation of the Neisseria gonorrhoeae-truncated denitrification pathway by the nitric oxide-sensitive repressor, NsrR, and nitrite-insensitive NarQ-NarP.
Overton TW; Whitehead R; Li Y; Snyder LA; Saunders NJ; Smith H; Cole JA
J Biol Chem; 2006 Nov; 281(44):33115-26. PubMed ID: 16954205
[TBL] [Abstract][Full Text] [Related]
11. Conservation of the biotin regulon and the BirA regulatory signal in Eubacteria and Archaea.
Rodionov DA; Mironov AA; Gelfand MS
Genome Res; 2002 Oct; 12(10):1507-16. PubMed ID: 12368242
[TBL] [Abstract][Full Text] [Related]
12. Comparative studies of transcriptional regulation mechanisms in a group of eight gamma-proteobacterial genomes.
Espinosa V; González AD; Vasconcelos AT; Huerta AM; Collado-Vides J
J Mol Biol; 2005 Nov; 354(1):184-99. PubMed ID: 16236313
[TBL] [Abstract][Full Text] [Related]
13. Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction.
Rückert C; Koch DJ; Rey DA; Albersmeier A; Mormann S; Pühler A; Kalinowski J
BMC Genomics; 2005 Sep; 6():121. PubMed ID: 16159395
[TBL] [Abstract][Full Text] [Related]
14. The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator.
Kohl TA; Baumbach J; Jungwirth B; Pühler A; Tauch A
J Biotechnol; 2008 Jul; 135(4):340-50. PubMed ID: 18573287
[TBL] [Abstract][Full Text] [Related]
15. Microarray analysis of gene regulation by oxygen, nitrate, nitrite, FNR, NarL and NarP during anaerobic growth of Escherichia coli: new insights into microbial physiology.
Overton TW; Griffiths L; Patel MD; Hobman JL; Penn CW; Cole JA; Constantinidou C
Biochem Soc Trans; 2006 Feb; 34(Pt 1):104-7. PubMed ID: 16417494
[TBL] [Abstract][Full Text] [Related]
16. A DNA region recognized by the nitric oxide-responsive transcriptional activator NorR is conserved in beta- and gamma-proteobacteria.
Büsch A; Pohlmann A; Friedrich B; Cramm R
J Bacteriol; 2004 Dec; 186(23):7980-7. PubMed ID: 15547270
[TBL] [Abstract][Full Text] [Related]
17. The small FNR regulon of Neisseria gonorrhoeae: comparison with the larger Escherichia coli FNR regulon and interaction with the NarQ-NarP regulon.
Whitehead RN; Overton TW; Snyder LA; McGowan SJ; Smith H; Cole JA; Saunders NJ
BMC Genomics; 2007 Jan; 8():35. PubMed ID: 17261178
[TBL] [Abstract][Full Text] [Related]
18. [Computer analysis of regulatory signals in bacterial genomes. Fnr binding segments].
Gerasimova AV; Rodionov DA; Mironov AA; Gel'fand MS
Mol Biol (Mosk); 2001; 35(6):1001-9. PubMed ID: 11771123
[TBL] [Abstract][Full Text] [Related]
19. O2-sensing and O2-dependent gene regulation in facultatively anaerobic bacteria.
Unden G; Becker S; Bongaerts J; Holighaus G; Schirawski J; Six S
Arch Microbiol; 1995 Aug; 164(2):81-90. PubMed ID: 8588737
[TBL] [Abstract][Full Text] [Related]
20. Identification of a bacterial regulatory system for ribonucleotide reductases by phylogenetic profiling.
Rodionov DA; Gelfand MS
Trends Genet; 2005 Jul; 21(7):385-9. PubMed ID: 15949864
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
