These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
4. Effects of nucleotide sequence alignment on phylogeny estimation: a case study of 18S rDNAs of apicomplexa. Morrison DA; Ellis JT Mol Biol Evol; 1997 Apr; 14(4):428-41. PubMed ID: 9100373 [TBL] [Abstract][Full Text] [Related]
5. Conflicting signal within a single gene confounds syllid phylogeny (Syllidae, Annelida). Aguado MT; Bleidorn C Mol Phylogenet Evol; 2010 Jun; 55(3):1128-38. PubMed ID: 20079860 [TBL] [Abstract][Full Text] [Related]
6. Evolution of the major lineages of tapeworms (Platyhelminthes: Cestoidea) inferred from 18S ribosomal DNA and elongation factor-1alpha. Olson PD; Caira JN J Parasitol; 1999 Dec; 85(6):1134-59. PubMed ID: 10647048 [TBL] [Abstract][Full Text] [Related]
7. Phylogenetic inferences from molecular sequences: review and critique. Brocchieri L Theor Popul Biol; 2001 Feb; 59(1):27-40. PubMed ID: 11243926 [TBL] [Abstract][Full Text] [Related]
8. Bayesian coestimation of phylogeny and sequence alignment. Lunter G; Miklós I; Drummond A; Jensen JL; Hein J BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354 [TBL] [Abstract][Full Text] [Related]
9. The power of phylogenetic approaches to detect horizontally transferred genes. Poptsova MS; Gogarten JP BMC Evol Biol; 2007 Mar; 7():45. PubMed ID: 17376230 [TBL] [Abstract][Full Text] [Related]
10. Cirripede phylogeny using a novel approach: molecular morphometrics. Billoud B; Guerrucci MA; Masselot M; Deutsch JS Mol Biol Evol; 2000 Oct; 17(10):1435-45. PubMed ID: 11018151 [TBL] [Abstract][Full Text] [Related]
11. Fast discovery and visualization of conserved regions in DNA sequences using quasi-alignment. Nagar A; Hahsler M BMC Bioinformatics; 2013; 14 Suppl 11(Suppl 11):S2. PubMed ID: 24564200 [TBL] [Abstract][Full Text] [Related]
12. Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria. Homma K; Fukuchi S; Nakamura Y; Gojobori T; Nishikawa K Mol Biol Evol; 2007 Mar; 24(3):805-13. PubMed ID: 17185745 [TBL] [Abstract][Full Text] [Related]
14. On the quality of tree-based protein classification. Lazareva-Ulitsky B; Diemer K; Thomas PD Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305 [TBL] [Abstract][Full Text] [Related]
15. Molecular phylogeny of Calyptratae (Diptera: Brachycera): the evolution of 18S and 16S ribosomal rDNAs in higher dipterans and their use in phylogenetic inference. Nirmala X; Hypsa V; Zurovec M Insect Mol Biol; 2001 Oct; 10(5):475-85. PubMed ID: 11881812 [TBL] [Abstract][Full Text] [Related]
18. The phylogenetic and ecological context of cultured and whole genome-sequenced planktonic bacteria from the coastal NW Mediterranean Sea. Lekunberri I; Gasol JM; Acinas SG; Gómez-Consarnau L; Crespo BG; Casamayor EO; Massana R; Pedrós-Alió C; Pinhassi J Syst Appl Microbiol; 2014 May; 37(3):216-28. PubMed ID: 24462268 [TBL] [Abstract][Full Text] [Related]
19. Probabilistic phylogenetic inference with insertions and deletions. Rivas E; Eddy SR PLoS Comput Biol; 2008 Sep; 4(9):e1000172. PubMed ID: 18787703 [TBL] [Abstract][Full Text] [Related]
20. Words in DNA sequences: some case studies based on their frequency statistics. Basu S; Burma DP; Chaudhuri P J Math Biol; 2003 Jun; 46(6):479-503. PubMed ID: 12783179 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]