BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

877 related articles for article (PubMed ID: 16287941)

  • 1. WindowMasker: window-based masker for sequenced genomes.
    Morgulis A; Gertz EM; Schäffer AA; Agarwala R
    Bioinformatics; 2006 Jan; 22(2):134-41. PubMed ID: 16287941
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RBR: library-less repeat detection for ESTs.
    Malde K; Schneeberger K; Coward E; Jonassen I
    Bioinformatics; 2006 Sep; 22(18):2232-6. PubMed ID: 16837527
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 4. HomologMiner: looking for homologous genomic groups in whole genomes.
    Hou M; Berman P; Hsu CH; Harris RS
    Bioinformatics; 2007 Apr; 23(8):917-25. PubMed ID: 17308341
    [TBL] [Abstract][Full Text] [Related]  

  • 5. OrthologID: automation of genome-scale ortholog identification within a parsimony framework.
    Chiu JC; Lee EK; Egan MG; Sarkar IN; Coruzzi GM; DeSalle R
    Bioinformatics; 2006 Mar; 22(6):699-707. PubMed ID: 16410324
    [TBL] [Abstract][Full Text] [Related]  

  • 6. GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.
    Castrignanò T; De Meo PD; Grillo G; Liuni S; Mignone F; Talamo IG; Pesole G
    Bioinformatics; 2006 Feb; 22(4):497-9. PubMed ID: 16267081
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Using RepeatMasker to identify repetitive elements in genomic sequences.
    Chen N
    Curr Protoc Bioinformatics; 2004 May; Chapter 4():Unit 4.10. PubMed ID: 18428725
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 9. GATA: a graphic alignment tool for comparative sequence analysis.
    Nix DA; Eisen MB
    BMC Bioinformatics; 2005 Jan; 6():9. PubMed ID: 15655071
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Nested Containment List (NCList): a new algorithm for accelerating interval query of genome alignment and interval databases.
    Alekseyenko AV; Lee CJ
    Bioinformatics; 2007 Jun; 23(11):1386-93. PubMed ID: 17234640
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Indel seeds for homology search.
    Mak D; Gelfand Y; Benson G
    Bioinformatics; 2006 Jul; 22(14):e341-9. PubMed ID: 16873491
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PhyloPat: phylogenetic pattern analysis of eukaryotic genes.
    Hulsen T; de Vlieg J; Groenen PM
    BMC Bioinformatics; 2006 Sep; 7():398. PubMed ID: 16948844
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Compressed indexing and local alignment of DNA.
    Lam TW; Sung WK; Tam SL; Wong CK; Yiu SM
    Bioinformatics; 2008 Mar; 24(6):791-7. PubMed ID: 18227115
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomes.
    Uchiyama I; Higuchi T; Kobayashi I
    BMC Bioinformatics; 2006 Oct; 7():472. PubMed ID: 17062155
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R
    BMC Bioinformatics; 2006 Mar; 7():143. PubMed ID: 16542424
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Homology search for genes.
    Cui X; Vinar T; Brejová B; Shasha D; Li M
    Bioinformatics; 2007 Jul; 23(13):i97-103. PubMed ID: 17646351
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Tracembler--software for in-silico chromosome walking in unassembled genomes.
    Dong Q; Wilkerson MD; Brendel V
    BMC Bioinformatics; 2007 May; 8():151. PubMed ID: 17490482
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Assembly reconciliation.
    Zimin AV; Smith DR; Sutton G; Yorke JA
    Bioinformatics; 2008 Jan; 24(1):42-5. PubMed ID: 18057021
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Efficient identification of DNA hybridization partners in a sequence database.
    Mann TP; Noble WS
    Bioinformatics; 2006 Jul; 22(14):e350-8. PubMed ID: 16873493
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Efficient computation of all perfect repeats in genomic sequences of up to half a gigabyte, with a case study on the human genome.
    Becher V; Deymonnaz A; Heiber P
    Bioinformatics; 2009 Jul; 25(14):1746-53. PubMed ID: 19451169
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 44.