877 related articles for article (PubMed ID: 16287941)
21. Pattern locator: a new tool for finding local sequence patterns in genomic DNA sequences.
Mrázek J; Xie S
Bioinformatics; 2006 Dec; 22(24):3099-100. PubMed ID: 17095514
[TBL] [Abstract][Full Text] [Related]
22. A precise and scalable method for querying genes in chromosomal banding regions based on cytogenetic annotations.
Yen KH; Lee C; Liu HS; Ho CL
Bioinformatics; 2005 Sep; 21(17):3469-74. PubMed ID: 15998663
[TBL] [Abstract][Full Text] [Related]
23. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes.
Parra G; Bradnam K; Korf I
Bioinformatics; 2007 May; 23(9):1061-7. PubMed ID: 17332020
[TBL] [Abstract][Full Text] [Related]
24. ACT: the Artemis Comparison Tool.
Carver TJ; Rutherford KM; Berriman M; Rajandream MA; Barrell BG; Parkhill J
Bioinformatics; 2005 Aug; 21(16):3422-3. PubMed ID: 15976072
[TBL] [Abstract][Full Text] [Related]
25. Identification and measurement of neighbor-dependent nucleotide substitution processes.
Arndt PF; Hwa T
Bioinformatics; 2005 May; 21(10):2322-8. PubMed ID: 15769841
[TBL] [Abstract][Full Text] [Related]
26. FunSiP: a modular and extensible classifier for the prediction of functional sites in DNA.
Van Bel M; Saeys Y; Van de Peer Y
Bioinformatics; 2008 Jul; 24(13):1532-3. PubMed ID: 18474505
[TBL] [Abstract][Full Text] [Related]
27. THOR: targeted high-throughput ortholog reconstructor.
Bainbridge MN; Warren RL; He A; Bilenky M; Robertson AG; Jones SJ
Bioinformatics; 2007 Oct; 23(19):2622-4. PubMed ID: 17038343
[TBL] [Abstract][Full Text] [Related]
28. A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
Liu Z; Meng J; Sun X
Biochem Biophys Res Commun; 2008 Apr; 368(2):223-30. PubMed ID: 18230342
[TBL] [Abstract][Full Text] [Related]
29. TruMatch--a BLAST post-processor that identifies bona fide sequence matches to genome assemblies.
Li W; Rehmeyer CJ; Staben C; Farman ML
Bioinformatics; 2005 May; 21(9):2097-8. PubMed ID: 15671115
[TBL] [Abstract][Full Text] [Related]
30. Alvira: comparative genomics of viral strains.
Enault F; Fremez R; Baranowski E; Faraut T
Bioinformatics; 2007 Aug; 23(16):2178-9. PubMed ID: 17550913
[TBL] [Abstract][Full Text] [Related]
31. AIMIE: a web-based environment for detection and interpretation of significant sequence motifs in prokaryotic genomes.
Mrázek J; Xie S; Guo X; Srivastava A
Bioinformatics; 2008 Apr; 24(8):1041-8. PubMed ID: 18304933
[TBL] [Abstract][Full Text] [Related]
32. SITEBLAST--rapid and sensitive local alignment of genomic sequences employing motif anchors.
Michael M; Dieterich C; Vingron M
Bioinformatics; 2005 May; 21(9):2093-4. PubMed ID: 15598827
[TBL] [Abstract][Full Text] [Related]
33. Tandem repeats over the edit distance.
Sokol D; Benson G; Tojeira J
Bioinformatics; 2007 Jan; 23(2):e30-5. PubMed ID: 17237101
[TBL] [Abstract][Full Text] [Related]
34. BRM-Parser: a tool for comprehensive analysis of BLAST and RepeatMasker results.
Bajpai A; Sridhar S; Reddy HM; Jesudasan RA
In Silico Biol; 2007; 7(4-5):399-403. PubMed ID: 18391232
[TBL] [Abstract][Full Text] [Related]
35. Identification of coding and non-coding sequences using local Holder exponent formalism.
Kulkarni OC; Vigneshwar R; Jayaraman VK; Kulkarni BD
Bioinformatics; 2005 Oct; 21(20):3818-23. PubMed ID: 16118261
[TBL] [Abstract][Full Text] [Related]
36. CLAGen: a tool for clustering and annotating gene sequences using a suffix tree algorithm.
Han Si; Lee SG; Kim KH; Choi CJ; Kim YH; Hwang KS
Biosystems; 2006 Jun; 84(3):175-82. PubMed ID: 16384634
[TBL] [Abstract][Full Text] [Related]
37. Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor.
Kohany O; Gentles AJ; Hankus L; Jurka J
BMC Bioinformatics; 2006 Oct; 7():474. PubMed ID: 17064419
[TBL] [Abstract][Full Text] [Related]
38. Gene function prediction based on genomic context clustering and discriminative learning: an application to bacteriophages.
Li J; Halgamuge SK; Kells CI; Tang SL
BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S6. PubMed ID: 17570149
[TBL] [Abstract][Full Text] [Related]
39. Recognition of multiple patterns in unaligned sets of sequences: comparison of kernel clustering method with other methods.
Kel A; Tikunov Y; Voss N; Wingender E
Bioinformatics; 2004 Jul; 20(10):1512-6. PubMed ID: 15231544
[TBL] [Abstract][Full Text] [Related]
40. VisGenome: visualization of single and comparative genome representations.
Jakubowska J; Hunt E; Chalmers M; McBride M; Dominiczak AF
Bioinformatics; 2007 Oct; 23(19):2641-2. PubMed ID: 17965437
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
