BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

82 related articles for article (PubMed ID: 16292353)

  • 1. Use of artificial genomes in assessing methods for atypical gene detection.
    Azad RK; Lawrence JG
    PLoS Comput Biol; 2005 Nov; 1(6):e56. PubMed ID: 16292353
    [TBL] [Abstract][Full Text] [Related]  

  • 2. EasyGene--a prokaryotic gene finder that ranks ORFs by statistical significance.
    Larsen TS; Krogh A
    BMC Bioinformatics; 2003 Jun; 4():21. PubMed ID: 12783628
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Domain-centric database to uncover structure of minimally characterized viral genomes.
    Bramley JC; Yenkin AL; Zaydman MA; DiAntonio A; Milbrandt JD; Buchser WJ
    Sci Data; 2020 Jun; 7(1):202. PubMed ID: 32587259
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Leveraging comparative genomics to uncover alien genes in bacterial genomes.
    Sengupta S; Azad RK
    Microb Genom; 2023 Jan; 9(1):. PubMed ID: 36748570
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The statistical power of
    Huang GD; Liu XM; Huang TL; Xia LC
    Synth Syst Biotechnol; 2019 Sep; 4(3):150-156. PubMed ID: 31508512
    [TBL] [Abstract][Full Text] [Related]  

  • 6. IslandCafe: Compositional Anomaly and Feature Enrichment Assessment for Delineation of Genomic Islands.
    Jani M; Azad RK
    G3 (Bethesda); 2019 Oct; 9(10):3273-3285. PubMed ID: 31387857
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-wide analysis of horizontally acquired genes in the genus Mycobacterium.
    Panda A; Drancourt M; Tuller T; Pontarotti P
    Sci Rep; 2018 Oct; 8(1):14817. PubMed ID: 30287860
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Insights into horizontal acquisition patterns of dormancy and reactivation regulon genes in mycobacterial species using a partitioning-based framework.
    Mehra V; Ghosh TS; Mande SS
    J Biosci; 2016 Sep; 41(3):475-85. PubMed ID: 27581938
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inferring horizontal gene transfer.
    Ravenhall M; Škunca N; Lassalle F; Dessimoz C
    PLoS Comput Biol; 2015 May; 11(5):e1004095. PubMed ID: 26020646
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Interpreting genomic data via entropic dissection.
    Azad RK; Li J
    Nucleic Acids Res; 2013 Jan; 41(1):e23. PubMed ID: 23036836
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Towards a better detection of horizontally transferred genes by combining unusual properties effectively.
    Xiong D; Xiao F; Liu L; Hu K; Tan Y; He S; Gao X
    PLoS One; 2012; 7(8):e43126. PubMed ID: 22905214
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Detection of horizontal transfer of individual genes by anomalous oligomer frequencies.
    Elhai J; Liu H; Taton A
    BMC Genomics; 2012 Jun; 13():245. PubMed ID: 22702893
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011.
    Bezuidt O; Pierneef R; Mncube K; Lima-Mendez G; Reva ON
    PLoS One; 2011; 6(10):e25702. PubMed ID: 22022434
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Towards more robust methods of alien gene detection.
    Azad RK; Lawrence JG
    Nucleic Acids Res; 2011 May; 39(9):e56. PubMed ID: 21297116
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A benchmark of parametric methods for horizontal transfers detection.
    Becq J; Churlaud C; Deschavanne P
    PLoS One; 2010 Apr; 5(4):e9989. PubMed ID: 20376325
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Whole genome evaluation of horizontal transfers in the pathogenic fungus Aspergillus fumigatus.
    Mallet LV; Becq J; Deschavanne P
    BMC Genomics; 2010 Mar; 11():171. PubMed ID: 20226043
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Detection of genomic islands via segmental genome heterogeneity.
    Arvey AJ; Azad RK; Raval A; Lawrence JG
    Nucleic Acids Res; 2009 Sep; 37(16):5255-66. PubMed ID: 19589805
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes through oligonucleotide usage.
    Ganesan H; Rakitianskaia AS; Davenport CF; Tümmler B; Reva ON
    BMC Bioinformatics; 2008 Aug; 9():333. PubMed ID: 18687122
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Estimating the extent of horizontal gene transfer in metagenomic sequences.
    Tamames J; Moya A
    BMC Genomics; 2008 Mar; 9():136. PubMed ID: 18366724
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Detecting laterally transferred genes: use of entropic clustering methods and genome position.
    Azad RK; Lawrence JG
    Nucleic Acids Res; 2007; 35(14):4629-39. PubMed ID: 17591616
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.