These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

297 related articles for article (PubMed ID: 16299586)

  • 1. Evidence of a large novel gene pool associated with prokaryotic genomic islands.
    Hsiao WW; Ung K; Aeschliman D; Bryan J; Finlay BB; Brinkman FS
    PLoS Genet; 2005 Nov; 1(5):e62. PubMed ID: 16299586
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SIGI: score-based identification of genomic islands.
    Merkl R
    BMC Bioinformatics; 2004 Mar; 5():22. PubMed ID: 15113412
    [TBL] [Abstract][Full Text] [Related]  

  • 3. IslandPath: aiding detection of genomic islands in prokaryotes.
    Hsiao W; Wan I; Jones SJ; Brinkman FS
    Bioinformatics; 2003 Feb; 19(3):418-20. PubMed ID: 12584130
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.
    Wolf YI; Rogozin IB; Kondrashov AS; Koonin EV
    Genome Res; 2001 Mar; 11(3):356-72. PubMed ID: 11230160
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A computational approach for identifying pathogenicity islands in prokaryotic genomes.
    Yoon SH; Hur CG; Kang HY; Kim YH; Oh TK; Kim JF
    BMC Bioinformatics; 2005 Jul; 6():184. PubMed ID: 16033657
    [TBL] [Abstract][Full Text] [Related]  

  • 6. IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis.
    Dhillon BK; Laird MR; Shay JA; Winsor GL; Lo R; Nizam F; Pereira SK; Waglechner N; McArthur AG; Langille MG; Brinkman FS
    Nucleic Acids Res; 2015 Jul; 43(W1):W104-8. PubMed ID: 25916842
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Pre_GI: a global map of ontological links between horizontally transferred genomic islands in bacterial and archaeal genomes.
    Pierneef R; Cronje L; Bezuidt O; Reva ON
    Database (Oxford); 2015 Jun; 2015():bav058. PubMed ID: 26200753
    [TBL] [Abstract][Full Text] [Related]  

  • 8. IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets.
    Bertelli C; Laird MR; Williams KP; ; Lau BY; Hoad G; Winsor GL; Brinkman FSL
    Nucleic Acids Res; 2017 Jul; 45(W1):W30-W35. PubMed ID: 28472413
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparative analysis of essential genes in prokaryotic genomic islands.
    Zhang X; Peng C; Zhang G; Gao F
    Sci Rep; 2015 Jul; 5():12561. PubMed ID: 26223387
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Defense islands in bacterial and archaeal genomes and prediction of novel defense systems.
    Makarova KS; Wolf YI; Snir S; Koonin EV
    J Bacteriol; 2011 Nov; 193(21):6039-56. PubMed ID: 21908672
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A large scale comparative genomic analysis reveals insertion sites for newly acquired genomic islands in bacterial genomes.
    Du P; Yang Y; Wang H; Liu D; Gao GF; Chen C
    BMC Microbiol; 2011 Jun; 11():135. PubMed ID: 21672261
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A quantitative account of genomic island acquisitions in prokaryotes.
    Roos TE; van Passel MW
    BMC Genomics; 2011 Aug; 12():427. PubMed ID: 21864345
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A novel family of integrases associated with prophages and genomic islands integrated within the tRNA-dihydrouridine synthase A (dusA) gene.
    Farrugia DN; Elbourne LD; Mabbutt BC; Paulsen IT
    Nucleic Acids Res; 2015 May; 43(9):4547-57. PubMed ID: 25883135
    [TBL] [Abstract][Full Text] [Related]  

  • 14. GIPSy: Genomic island prediction software.
    Soares SC; Geyik H; Ramos RT; de Sá PH; Barbosa EG; Baumbach J; Figueiredo HC; Miyoshi A; Tauch A; Silva A; Azevedo V
    J Biotechnol; 2016 Aug; 232():2-11. PubMed ID: 26376473
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A new experimental approach for studying bacterial genomic island evolution identifies island genes with bacterial host-specific expression patterns.
    Wilson JW; Nickerson CA
    BMC Evol Biol; 2006 Jan; 6():2. PubMed ID: 16396675
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genomic islands and the ecology and evolution of Prochlorococcus.
    Coleman ML; Sullivan MB; Martiny AC; Steglich C; Barry K; Delong EF; Chisholm SW
    Science; 2006 Mar; 311(5768):1768-70. PubMed ID: 16556843
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SSG-LUGIA: Single Sequence based Genome Level Unsupervised Genomic Island Prediction Algorithm.
    Ibtehaz N; Ahmed I; Ahmed MS; Rahman MS; Azad RK; Bayzid MS
    Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34058749
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Flexible genomic islands as drivers of genome evolution.
    Rodriguez-Valera F; Martin-Cuadrado AB; López-Pérez M
    Curr Opin Microbiol; 2016 Jun; 31():154-160. PubMed ID: 27085300
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The molecular basis of infectious diseases: pathogenicity islands and other mobile genetic elements. A review.
    Hacker J; Blum-Oehler G; Hochhut B; Dobrindt U
    Acta Microbiol Immunol Hung; 2003; 50(4):321-30. PubMed ID: 14750434
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes.
    Bocs S; Danchin A; Médigue C
    BMC Bioinformatics; 2002; 3():5. PubMed ID: 11879526
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.