These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

141 related articles for article (PubMed ID: 16303794)

  • 21. Autoregulatory feedback controls sequential action of cis-regulatory modules at the brinker locus.
    Dunipace L; Saunders A; Ashe HL; Stathopoulos A
    Dev Cell; 2013 Sep; 26(5):536-43. PubMed ID: 24044892
    [TBL] [Abstract][Full Text] [Related]  

  • 22. A novel method for predicting activity of cis-regulatory modules, based on a diverse training set.
    Yang W; Sinha S
    Bioinformatics; 2017 Jan; 33(1):1-7. PubMed ID: 27609510
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Simulations of enhancer evolution provide mechanistic insights into gene regulation.
    Duque T; Samee MA; Kazemian M; Pham HN; Brodsky MH; Sinha S
    Mol Biol Evol; 2014 Jan; 31(1):184-200. PubMed ID: 24097306
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Motif-blind, genome-wide discovery of cis-regulatory modules in Drosophila and mouse.
    Kantorovitz MR; Kazemian M; Kinston S; Miranda-Saavedra D; Zhu Q; Robinson GE; Göttgens B; Halfon MS; Sinha S
    Dev Cell; 2009 Oct; 17(4):568-79. PubMed ID: 19853570
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Genome Surveyor 2.0: cis-regulatory analysis in Drosophila.
    Kazemian M; Brodsky MH; Sinha S
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W79-85. PubMed ID: 21593125
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Functional dissection of the Hox protein Abdominal-B in Drosophila cell culture.
    Zhai Z; Yang X; Lohmann I
    Biochem Biophys Res Commun; 2011 Nov; 414(4):761-6. PubMed ID: 22005458
    [TBL] [Abstract][Full Text] [Related]  

  • 27. The FlyBase database of the Drosophila genome projects and community literature.
    FlyBase Consortium
    Nucleic Acids Res; 2002 Jan; 30(1):106-8. PubMed ID: 11752267
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Characterization of cis-regulatory elements controlling repo transcription in Drosophila melanogaster.
    Johnson RW; Wood JL; Jones BW
    Gene; 2012 Jan; 492(1):167-76. PubMed ID: 22051777
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Levers and fulcrums: progress in cis-regulatory motif models.
    Birney E
    Nat Methods; 2008 Apr; 5(4):297-8. PubMed ID: 18376393
    [No Abstract]   [Full Text] [Related]  

  • 30. Improved accuracy of supervised CRM discovery with interpolated Markov models and cross-species comparison.
    Kazemian M; Zhu Q; Halfon MS; Sinha S
    Nucleic Acids Res; 2011 Dec; 39(22):9463-72. PubMed ID: 21821659
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Using hexamers to predict cis-regulatory motifs in Drosophila.
    Chan BY; Kibler D
    BMC Bioinformatics; 2005 Oct; 6():262. PubMed ID: 16253142
    [TBL] [Abstract][Full Text] [Related]  

  • 32. MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa.
    Catalano D; Licciulli F; Turi A; Grillo G; Saccone C; D'Elia D
    BMC Bioinformatics; 2006 Jan; 7():36. PubMed ID: 16433928
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Flanking sequence context-dependent transcription factor binding in early Drosophila development.
    Stringham JL; Brown AS; Drewell RA; Dresch JM
    BMC Bioinformatics; 2013 Oct; 14():298. PubMed ID: 24093548
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Automated protein-DNA interaction screening of Drosophila regulatory elements.
    Hens K; Feuz JD; Isakova A; Iagovitina A; Massouras A; Bryois J; Callaerts P; Celniker SE; Deplancke B
    Nat Methods; 2011 Oct; 8(12):1065-70. PubMed ID: 22037703
    [TBL] [Abstract][Full Text] [Related]  

  • 35. A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites.
    Khoueiry P; Rothbächer U; Ohtsuka Y; Daian F; Frangulian E; Roure A; Dubchak I; Lemaire P
    Curr Biol; 2010 May; 20(9):792-802. PubMed ID: 20434338
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Evolution of Hox post-transcriptional regulation by alternative polyadenylation and microRNA modulation within 12 Drosophila genomes.
    Patraquim P; Warnefors M; Alonso CR
    Mol Biol Evol; 2011 Sep; 28(9):2453-60. PubMed ID: 21436120
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Stubb: a program for discovery and analysis of cis-regulatory modules.
    Sinha S; Liang Y; Siggia E
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W555-9. PubMed ID: 16845069
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Single embryo-resolution quantitative analysis of reporters permits multiplex spatial cis-regulatory analysis.
    Guay CL; McQuade ST; Nam J
    Dev Biol; 2017 Feb; 422(2):92-104. PubMed ID: 28099870
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Drosophila melanogaster: a case study of a model genomic sequence and its consequences.
    Ashburner M; Bergman CM
    Genome Res; 2005 Dec; 15(12):1661-7. PubMed ID: 16339363
    [TBL] [Abstract][Full Text] [Related]  

  • 40. ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments.
    Hammal F; de Langen P; Bergon A; Lopez F; Ballester B
    Nucleic Acids Res; 2022 Jan; 50(D1):D316-D325. PubMed ID: 34751401
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.