843 related articles for article (PubMed ID: 16351749)
1. NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans and C. briggsae.
Rambaldi D; Guffanti A; Morandi P; Cassata G
BMC Bioinformatics; 2005 Dec; 6 Suppl 4(Suppl 4):S22. PubMed ID: 16351749
[TBL] [Abstract][Full Text] [Related]
2. CisOrtho: a program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting.
Bigelow HR; Wenick AS; Wong A; Hobert O
BMC Bioinformatics; 2004 Mar; 5():27. PubMed ID: 15113408
[TBL] [Abstract][Full Text] [Related]
3. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
Stein LD; Bao Z; Blasiar D; Blumenthal T; Brent MR; Chen N; Chinwalla A; Clarke L; Clee C; Coghlan A; Coulson A; D'Eustachio P; Fitch DH; Fulton LA; Fulton RE; Griffiths-Jones S; Harris TW; Hillier LW; Kamath R; Kuwabara PE; Mardis ER; Marra MA; Miner TL; Minx P; Mullikin JC; Plumb RW; Rogers J; Schein JE; Sohrmann M; Spieth J; Stajich JE; Wei C; Willey D; Wilson RK; Durbin R; Waterston RH
PLoS Biol; 2003 Nov; 1(2):E45. PubMed ID: 14624247
[TBL] [Abstract][Full Text] [Related]
4. Large synteny blocks revealed between Caenorhabditis elegans and Caenorhabditis briggsae genomes using OrthoCluster.
Vergara IA; Chen N
BMC Genomics; 2010 Sep; 11():516. PubMed ID: 20868500
[TBL] [Abstract][Full Text] [Related]
5. MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes.
Marinescu VD; Kohane IS; Riva A
BMC Bioinformatics; 2005 Mar; 6():79. PubMed ID: 15799782
[TBL] [Abstract][Full Text] [Related]
6. Comparative genomics in C. elegans, C. briggsae, and other Caenorhabditis species.
Coghlan A; Stajich JE; Harris TW
Methods Mol Biol; 2006; 351():13-29. PubMed ID: 16988423
[TBL] [Abstract][Full Text] [Related]
7. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
Zhang DL; Ji L; Li YD
Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
[TBL] [Abstract][Full Text] [Related]
8. The gut esterase gene (ges-1) from the nematodes Caenorhabditis elegans and Caenorhabditis briggsae.
Kennedy BP; Aamodt EJ; Allen FL; Chung MA; Heschl MF; McGhee JD
J Mol Biol; 1993 Feb; 229(4):890-908. PubMed ID: 8445654
[TBL] [Abstract][Full Text] [Related]
9. GATA: a graphic alignment tool for comparative sequence analysis.
Nix DA; Eisen MB
BMC Bioinformatics; 2005 Jan; 6():9. PubMed ID: 15655071
[TBL] [Abstract][Full Text] [Related]
10. Novel and improved Caenorhabditis briggsae gene models generated by community curation.
Moya ND; Stevens L; Miller IR; Sokol CE; Galindo JL; Bardas AD; Koh ESH; Rozenich J; Yeo C; Xu M; Andersen EC
BMC Genomics; 2023 Aug; 24(1):486. PubMed ID: 37626289
[TBL] [Abstract][Full Text] [Related]
11. Conservation of sequence and function of the pag-3 genes from C. elegans and C. briggsae.
Aamodt E; Shen L; Marra M; Schein J; Rose B; McDermott JB
Gene; 2000 Feb; 243(1-2):67-74. PubMed ID: 10675614
[TBL] [Abstract][Full Text] [Related]
12. The draft genome sequence of the nematode Caenorhabditis briggsae, a companion to C. elegans.
Gupta BP; Sternberg PW
Genome Biol; 2003; 4(12):238. PubMed ID: 14659008
[TBL] [Abstract][Full Text] [Related]
13. Evolution of regulatory elements producing a conserved gene expression pattern in Caenorhabditis.
Wang X; Greenberg JF; Chamberlin HM
Evol Dev; 2004; 6(4):237-45. PubMed ID: 15230964
[TBL] [Abstract][Full Text] [Related]
14. Function and evolution of the serotonin-synthetic bas-1 gene and other aromatic amino acid decarboxylase genes in Caenorhabditis.
Hare EE; Loer CM
BMC Evol Biol; 2004 Aug; 4():24. PubMed ID: 15287963
[TBL] [Abstract][Full Text] [Related]
15. Computational analysis of microRNA targets in Caenorhabditis elegans.
Watanabe Y; Yachie N; Numata K; Saito R; Kanai A; Tomita M
Gene; 2006 Jan; 365():2-10. PubMed ID: 16356665
[TBL] [Abstract][Full Text] [Related]
16. Comparative promoter region analysis powered by CORG.
Dieterich C; Grossmann S; Tanzer A; Röpcke S; Arndt PF; Stadler PF; Vingron M
BMC Genomics; 2005 Feb; 6():24. PubMed ID: 15723697
[TBL] [Abstract][Full Text] [Related]
17. nGASP--the nematode genome annotation assessment project.
Coghlan A; Fiedler TJ; McKay SJ; Flicek P; Harris TW; Blasiar D; ; Stein LD
BMC Bioinformatics; 2008 Dec; 9():549. PubMed ID: 19099578
[TBL] [Abstract][Full Text] [Related]
18. Functional genomics in Caenorhabditis elegans: An approach involving comparisons of sequences from related nematodes.
Thacker C; Marra MA; Jones A; Baillie DL; Rose AM
Genome Res; 1999 Apr; 9(4):348-59. PubMed ID: 10207157
[TBL] [Abstract][Full Text] [Related]
19. Pattern of selective constraint in C. elegans and C. briggsae genomes.
Shabalina SA; Kondrashov AS
Genet Res; 1999 Aug; 74(1):23-30. PubMed ID: 10505405
[TBL] [Abstract][Full Text] [Related]
20. Differences in non-LTR retrotransposons within C. elegans and C. briggsae genomes.
Zagrobelny M; Jeffares DC; Arctander P
Gene; 2004 Apr; 330():61-6. PubMed ID: 15087124
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
