These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

235 related articles for article (PubMed ID: 16375469)

  • 1. Adaptive resolution molecular-dynamics simulation: changing the degrees of freedom on the fly.
    Praprotnik M; Delle Site L; Kremer K
    J Chem Phys; 2005 Dec; 123(22):224106. PubMed ID: 16375469
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Concurrent triple-scale simulation of molecular liquids.
    Delgado-Buscalioni R; Kremer K; Praprotnik M
    J Chem Phys; 2008 Mar; 128(11):114110. PubMed ID: 18361557
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Modeling diffusive dynamics in adaptive resolution simulation of liquid water.
    Matysiak S; Clementi C; Praprotnik M; Kremer K; Delle Site L
    J Chem Phys; 2008 Jan; 128(2):024503. PubMed ID: 18205455
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A macromolecule in a solvent: adaptive resolution molecular dynamics simulation.
    Praprotnik M; Delle Site L; Kremer K
    J Chem Phys; 2007 Apr; 126(13):134902. PubMed ID: 17430062
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Separation of time scale and coupling in the motion governed by the coarse-grained and fine degrees of freedom in a polypeptide backbone.
    Murarka RK; Liwo A; Scheraga HA
    J Chem Phys; 2007 Oct; 127(15):155103. PubMed ID: 17949219
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recent progress in adaptive multiscale molecular dynamics simulations of soft matter.
    Nielsen SO; Bulo RE; Moore PB; Ensing B
    Phys Chem Chem Phys; 2010 Oct; 12(39):12401-14. PubMed ID: 20734007
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Smart resolution replica exchange: an efficient algorithm for exploring complex energy landscapes.
    Liu P; Voth GA
    J Chem Phys; 2007 Jan; 126(4):045106. PubMed ID: 17286516
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Coupling different levels of resolution in molecular simulations.
    Poblete S; Praprotnik M; Kremer K; Delle Site L
    J Chem Phys; 2010 Mar; 132(11):114101. PubMed ID: 20331275
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Hybrid simulations: combining atomistic and coarse-grained force fields using virtual sites.
    Rzepiela AJ; Louhivuori M; Peter C; Marrink SJ
    Phys Chem Chem Phys; 2011 Jun; 13(22):10437-48. PubMed ID: 21494747
    [TBL] [Abstract][Full Text] [Related]  

  • 10. New coarse-graining procedure for the dynamics of charged spherical nanoparticles in solution.
    Dahirel V; Jardat M; Dufrêche JF; Turq P
    J Chem Phys; 2007 Mar; 126(11):114108. PubMed ID: 17381197
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Adaptive resolution simulation of an atomistic protein in MARTINI water.
    Zavadlav J; Melo MN; Marrink SJ; Praprotnik M
    J Chem Phys; 2014 Feb; 140(5):054114. PubMed ID: 24511929
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Coarse-grained model for phospholipid/cholesterol bilayer.
    Murtola T; Falck E; Patra M; Karttunen M; Vattulainen I
    J Chem Phys; 2004 Nov; 121(18):9156-65. PubMed ID: 15527384
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Coupling atomistic and continuum hydrodynamics through a mesoscopic model: application to liquid water.
    Delgado-Buscalioni R; Kremer K; Praprotnik M
    J Chem Phys; 2009 Dec; 131(24):244107. PubMed ID: 20059054
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Hybrid particle-field molecular dynamics simulations for dense polymer systems.
    Milano G; Kawakatsu T
    J Chem Phys; 2009 Jun; 130(21):214106. PubMed ID: 19508055
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Self-assembling dipeptides: including solvent degrees of freedom in a coarse-grained model.
    Villa A; van der Vegt NF; Peter C
    Phys Chem Chem Phys; 2009 Mar; 11(12):2068-76. PubMed ID: 19280017
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Reconstructing atomistic detail for coarse-grained models with resolution exchange.
    Liu P; Shi Q; Lyman E; Voth GA
    J Chem Phys; 2008 Sep; 129(11):114103. PubMed ID: 19044946
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Spatially adaptive lattice coarse-grained Monte Carlo simulations for diffusion of interacting molecules.
    Chatterjee A; Vlachos DG; Katsoulakis MA
    J Chem Phys; 2004 Dec; 121(22):11420-31. PubMed ID: 15634102
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Coarse-grained modeling for macromolecular chemistry.
    Karimi-Varzaneh HA; Müller-Plathe F
    Top Curr Chem; 2012; 307():295-321. PubMed ID: 21360319
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A multiscale coarse-graining method for biomolecular systems.
    Izvekov S; Voth GA
    J Phys Chem B; 2005 Feb; 109(7):2469-73. PubMed ID: 16851243
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Adaptive resolution scheme for efficient hybrid atomistic-mesoscale molecular dynamics simulations of dense liquids.
    Praprotnik M; Delle Site L; Kremer K
    Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Jun; 73(6 Pt 2):066701. PubMed ID: 16907017
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.