194 related articles for article (PubMed ID: 16376130)
1. Colored Petri net modeling and simulation of signal transduction pathways.
Lee DY; Zimmer R; Lee SY; Park S
Metab Eng; 2006 Mar; 8(2):112-22. PubMed ID: 16376130
[TBL] [Abstract][Full Text] [Related]
2. Modeling and simulation of molecular biology systems using petri nets: modeling goals of various approaches.
Hardy S; Robillard PN
J Bioinform Comput Biol; 2004 Dec; 2(4):595-613. PubMed ID: 15617157
[TBL] [Abstract][Full Text] [Related]
3. Reduction of mathematical models of signal transduction networks: simulation-based approach applied to EGF receptor signalling.
Conzelmann H; Saez-Rodriguez J; Sauter T; Bullinger E; Allgöwer F; Gilles ED
Syst Biol (Stevenage); 2004 Jun; 1(1):159-69. PubMed ID: 17052126
[TBL] [Abstract][Full Text] [Related]
4. Constructing biological pathway models with hybrid functional petri nets.
Doi A; Fujita S; Matsuno H; Nagasaki M; Miyano S
Stud Health Technol Inform; 2011; 162():92-112. PubMed ID: 21685566
[TBL] [Abstract][Full Text] [Related]
5. Structural modeling and analysis of signaling pathways based on Petri nets.
Li C; Suzuki S; Ge QW; Nakata M; Matsuno H; Miyano S
J Bioinform Comput Biol; 2006 Oct; 4(5):1119-40. PubMed ID: 17099944
[TBL] [Abstract][Full Text] [Related]
6. Computational modeling of signal transduction networks without kinetic parameters: Petri net approaches.
Koch I; Büttner B
Am J Physiol Cell Physiol; 2023 May; 324(5):C1126-C1140. PubMed ID: 36878844
[TBL] [Abstract][Full Text] [Related]
7. Quantitative petri net model of gene regulated metabolic networks in the cell.
Chen M; Hofestädt R
Stud Health Technol Inform; 2011; 162():38-55. PubMed ID: 21685563
[TBL] [Abstract][Full Text] [Related]
8. A data-driven computational model of the ErbB receptor signaling network.
Schoeberl B; Pace E; Howard S; Garantcharova V; Kudla A; Sorger PK; Nielsen UB
Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():53-4. PubMed ID: 17946779
[TBL] [Abstract][Full Text] [Related]
9. Modularization of biochemical networks based on classification of Petri net t-invariants.
Grafahrend-Belau E; Schreiber F; Heiner M; Sackmann A; Junker BH; Grunwald S; Speer A; Winder K; Koch I
BMC Bioinformatics; 2008 Feb; 9():90. PubMed ID: 18257938
[TBL] [Abstract][Full Text] [Related]
10. Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber.
Koch I; Junker BH; Heiner M
Bioinformatics; 2005 Apr; 21(7):1219-26. PubMed ID: 15546934
[TBL] [Abstract][Full Text] [Related]
11. An integrated model of epidermal growth factor receptor trafficking and signal transduction.
Resat H; Ewald JA; Dixon DA; Wiley HS
Biophys J; 2003 Aug; 85(2):730-43. PubMed ID: 12885624
[TBL] [Abstract][Full Text] [Related]
12. Ontology based standardization of petri net modeling for signaling pathways.
Takai-Igarashi T
Stud Health Technol Inform; 2011; 162():122-9. PubMed ID: 21685568
[TBL] [Abstract][Full Text] [Related]
13. Ontology based standardization of Petri net modeling for signaling pathways.
Takai-Igarashi T
In Silico Biol; 2005; 5(5-6):529-36. PubMed ID: 16268794
[TBL] [Abstract][Full Text] [Related]
14. Learning Petri net models of non-linear gene interactions.
Mayo M
Biosystems; 2005 Oct; 82(1):74-82. PubMed ID: 16024165
[TBL] [Abstract][Full Text] [Related]
15. Petri net based model of the body iron homeostasis.
Formanowicz D; Sackmann A; Formanowicz P; Błazewicz J
J Biomed Inform; 2007 Oct; 40(5):476-85. PubMed ID: 17258508
[TBL] [Abstract][Full Text] [Related]
16. Topological analysis of metabolic networks based on petri net theory.
Zevedei-Oancea I; Schuster S
Stud Health Technol Inform; 2011; 162():17-37. PubMed ID: 21685562
[TBL] [Abstract][Full Text] [Related]
17. Quantitative Petri net model of gene regulated metabolic networks in the cell.
Chen M; Hofestädt R
In Silico Biol; 2003; 3(3):347-65. PubMed ID: 12954095
[TBL] [Abstract][Full Text] [Related]
18. A methodological approach for using high-level Petri Nets to model the immune system response.
Pennisi M; Cavalieri S; Motta S; Pappalardo F
BMC Bioinformatics; 2016 Dec; 17(Suppl 19):498. PubMed ID: 28155706
[TBL] [Abstract][Full Text] [Related]
19. Application of Petri net based analysis techniques to signal transduction pathways.
Sackmann A; Heiner M; Koch I
BMC Bioinformatics; 2006 Nov; 7():482. PubMed ID: 17081284
[TBL] [Abstract][Full Text] [Related]
20. Robustness analysis of the detailed kinetic model of an ErbB signaling network by using dynamic sensitivity.
Masunaga H; Sugimoto Y; Magi S; Itasaki R; Okada-Hatakeyama M; Kurata H
PLoS One; 2017; 12(5):e0178250. PubMed ID: 28542548
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
