BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

196 related articles for article (PubMed ID: 16376595)

  • 21. Homology model-based virtual screening for GPCR ligands using docking and target-biased scoring.
    Radestock S; Weil T; Renner S
    J Chem Inf Model; 2008 May; 48(5):1104-17. PubMed ID: 18442221
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Ranking targets in structure-based virtual screening of three-dimensional protein libraries: methods and problems.
    Kellenberger E; Foata N; Rognan D
    J Chem Inf Model; 2008 May; 48(5):1014-25. PubMed ID: 18412328
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Ligand-target interaction-based weighting of substructures for virtual screening.
    Crisman TJ; Sisay MT; Bajorath J
    J Chem Inf Model; 2008 Oct; 48(10):1955-64. PubMed ID: 18821751
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Selection of in silico drug screening results for G-protein-coupled receptors by using universal active probes.
    Wada M; Kanamori E; Nakamura H; Fukunishi Y
    J Chem Inf Model; 2011 Sep; 51(9):2398-407. PubMed ID: 21848279
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Consensus scoring with feature selection for structure-based virtual screening.
    Teramoto R; Fukunishi H
    J Chem Inf Model; 2008 Feb; 48(2):288-95. PubMed ID: 18229906
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Novel method for generating structure-based pharmacophores using energetic analysis.
    Salam NK; Nuti R; Sherman W
    J Chem Inf Model; 2009 Oct; 49(10):2356-68. PubMed ID: 19761201
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Investigation of MM-PBSA rescoring of docking poses.
    Thompson DC; Humblet C; Joseph-McCarthy D
    J Chem Inf Model; 2008 May; 48(5):1081-91. PubMed ID: 18465849
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Impact of scoring functions on enrichment in docking-based virtual screening: an application study on renin inhibitors.
    Krovat EM; Langer T
    J Chem Inf Comput Sci; 2004; 44(3):1123-9. PubMed ID: 15154781
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Discovery of small molecule inhibitors of integrin alphavbeta3 through structure-based virtual screening.
    Zhou Y; Peng H; Ji Q; Qi J; Zhu Z; Yang C
    Bioorg Med Chem Lett; 2006 Nov; 16(22):5878-82. PubMed ID: 16982193
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Role of binding entropy in the refinement of protein-ligand docking predictions: analysis based on the use of 11 scoring functions.
    Ruvinsky AM
    J Comput Chem; 2007 Jun; 28(8):1364-72. PubMed ID: 17342720
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A critical assessment of docking programs and scoring functions.
    Warren GL; Andrews CW; Capelli AM; Clarke B; LaLonde J; Lambert MH; Lindvall M; Nevins N; Semus SF; Senger S; Tedesco G; Wall ID; Woolven JM; Peishoff CE; Head MS
    J Med Chem; 2006 Oct; 49(20):5912-31. PubMed ID: 17004707
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Supervised consensus scoring for docking and virtual screening.
    Teramoto R; Fukunishi H
    J Chem Inf Model; 2007; 47(2):526-34. PubMed ID: 17295466
    [TBL] [Abstract][Full Text] [Related]  

  • 33. PSI-DOCK: towards highly efficient and accurate flexible ligand docking.
    Pei J; Wang Q; Liu Z; Li Q; Yang K; Lai L
    Proteins; 2006 Mar; 62(4):934-46. PubMed ID: 16395666
    [TBL] [Abstract][Full Text] [Related]  

  • 34. A general technique to rank protein-ligand binding affinities and determine allosteric versus direct binding site competition in compound mixtures.
    Annis DA; Nazef N; Chuang CC; Scott MP; Nash HM
    J Am Chem Soc; 2004 Dec; 126(47):15495-503. PubMed ID: 15563178
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Comparative assessment of scoring functions on a diverse test set.
    Cheng T; Li X; Li Y; Liu Z; Wang R
    J Chem Inf Model; 2009 Apr; 49(4):1079-93. PubMed ID: 19358517
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Alternative global goodness metrics and sensitivity analysis: heuristics to check the robustness of conclusions from studies comparing virtual screening methods.
    Sheridan RP
    J Chem Inf Model; 2008 Feb; 48(2):426-33. PubMed ID: 18247505
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Enhanced virtual screening by combined use of two docking methods: getting the most on a limited budget.
    Maiorov V; Sheridan RP
    J Chem Inf Model; 2005; 45(4):1017-23. PubMed ID: 16045296
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Glide: a new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening.
    Halgren TA; Murphy RB; Friesner RA; Beard HS; Frye LL; Pollard WT; Banks JL
    J Med Chem; 2004 Mar; 47(7):1750-9. PubMed ID: 15027866
    [TBL] [Abstract][Full Text] [Related]  

  • 39. LigMatch: a multiple structure-based ligand matching method for 3D virtual screening.
    Kinnings SL; Jackson RM
    J Chem Inf Model; 2009 Sep; 49(9):2056-66. PubMed ID: 19685924
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Interpretation of scoring functions using 3D molecular fields. Mapping the diacyl-hydrazine-binding pocket of an insect ecdysone receptor.
    Bordas B; Belai I; Lopata A; Szanto Z
    J Chem Inf Model; 2007; 47(1):176-85. PubMed ID: 17238263
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.