178 related articles for article (PubMed ID: 16381909)
1. Visualizing syntenic relationships among the hemiascomycetes with the Yeast Gene Order Browser.
Byrne KP; Wolfe KH
Nucleic Acids Res; 2006 Jan; 34(Database issue):D452-5. PubMed ID: 16381909
[TBL] [Abstract][Full Text] [Related]
2. The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species.
Byrne KP; Wolfe KH
Genome Res; 2005 Oct; 15(10):1456-61. PubMed ID: 16169922
[TBL] [Abstract][Full Text] [Related]
3. A pipeline for automated annotation of yeast genome sequences by a conserved-synteny approach.
Proux-Wéra E; Armisén D; Byrne KP; Wolfe KH
BMC Bioinformatics; 2012 Sep; 13():237. PubMed ID: 22984983
[TBL] [Abstract][Full Text] [Related]
4. The Ashbya Genome Database (AGD)--a tool for the yeast community and genome biologists.
Hermida L; Brachat S; Voegeli S; Philippsen P; Primig M
Nucleic Acids Res; 2005 Jan; 33(Database issue):D348-52. PubMed ID: 15608214
[TBL] [Abstract][Full Text] [Related]
5. Gene-interleaving patterns of synteny in the Saccharomyces cerevisiae genome: are they proof of an ancient genome duplication event?
Martin N; Ruedi EA; Leduc R; Sun FJ; Caetano-Anollés G
Biol Direct; 2007 Sep; 2():23. PubMed ID: 17894859
[TBL] [Abstract][Full Text] [Related]
6. Génolevures: comparative genomics and molecular evolution of hemiascomycetous yeasts.
Sherman D; Durrens P; Beyne E; Nikolski M; Souciet JL;
Nucleic Acids Res; 2004 Jan; 32(Database issue):D315-8. PubMed ID: 14681422
[TBL] [Abstract][Full Text] [Related]
7. Systematic discovery of unannotated genes in 11 yeast species using a database of orthologous genomic segments.
OhÉigeartaigh SS; Armisén D; Byrne KP; Wolfe KH
BMC Genomics; 2011 Jul; 12():377. PubMed ID: 21791067
[TBL] [Abstract][Full Text] [Related]
8. Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level.
Gehrmann T; Reinders MJ
Bioinformatics; 2015 Nov; 31(21):3437-44. PubMed ID: 26116928
[TBL] [Abstract][Full Text] [Related]
9. Synteny Portal: a web-based application portal for synteny block analysis.
Lee J; Hong WY; Cho M; Sim M; Lee D; Ko Y; Kim J
Nucleic Acids Res; 2016 Jul; 44(W1):W35-40. PubMed ID: 27154270
[TBL] [Abstract][Full Text] [Related]
10. YEASTRACT+: a portal for cross-species comparative genomics of transcription regulation in yeasts.
Monteiro PT; Oliveira J; Pais P; Antunes M; Palma M; Cavalheiro M; Galocha M; Godinho CP; Martins LC; Bourbon N; Mota MN; Ribeiro RA; Viana R; Sá-Correia I; Teixeira MC
Nucleic Acids Res; 2020 Jan; 48(D1):D642-D649. PubMed ID: 31586406
[TBL] [Abstract][Full Text] [Related]
11. Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes.
Sherman DJ; Martin T; Nikolski M; Cayla C; Souciet JL; Durrens P;
Nucleic Acids Res; 2009 Jan; 37(Database issue):D550-4. PubMed ID: 19015150
[TBL] [Abstract][Full Text] [Related]
12. Comparative genome analysis and gene finding in Candida species using CGOB.
Maguire SL; ÓhÉigeartaigh SS; Byrne KP; Schröder MS; O'Gaora P; Wolfe KH; Butler G
Mol Biol Evol; 2013 Jun; 30(6):1281-91. PubMed ID: 23486613
[TBL] [Abstract][Full Text] [Related]
13. Genolevures complete genomes provide data and tools for comparative genomics of hemiascomycetous yeasts.
Sherman D; Durrens P; Iragne F; Beyne E; Nikolski M; Souciet JL
Nucleic Acids Res; 2006 Jan; 34(Database issue):D432-5. PubMed ID: 16381905
[TBL] [Abstract][Full Text] [Related]
14. Comparative genomics of protoploid Saccharomycetaceae.
; Souciet JL; Dujon B; Gaillardin C; Johnston M; Baret PV; Cliften P; Sherman DJ; Weissenbach J; Westhof E; Wincker P; Jubin C; Poulain J; Barbe V; Ségurens B; Artiguenave F; Anthouard V; Vacherie B; Val ME; Fulton RS; Minx P; Wilson R; Durrens P; Jean G; Marck C; Martin T; Nikolski M; Rolland T; Seret ML; Casarégola S; Despons L; Fairhead C; Fischer G; Lafontaine I; Leh V; Lemaire M; de Montigny J; Neuvéglise C; Thierry A; Blanc-Lenfle I; Bleykasten C; Diffels J; Fritsch E; Frangeul L; Goëffon A; Jauniaux N; Kachouri-Lafond R; Payen C; Potier S; Pribylova L; Ozanne C; Richard GF; Sacerdot C; Straub ML; Talla E
Genome Res; 2009 Oct; 19(10):1696-709. PubMed ID: 19525356
[TBL] [Abstract][Full Text] [Related]
15. The Plant Orthology Browser: An Orthology and Gene-Order Visualizer for Plant Comparative Genomics.
Tulpan D; Leger S
Plant Genome; 2017 Mar; 10(1):. PubMed ID: 28464063
[TBL] [Abstract][Full Text] [Related]
16. Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii.
Brachat S; Dietrich FS; Voegeli S; Zhang Z; Stuart L; Lerch A; Gates K; Gaffney T; Philippsen P
Genome Biol; 2003; 4(7):R45. PubMed ID: 12844361
[TBL] [Abstract][Full Text] [Related]
17. Transcriptional regulators of seven yeast species: comparative genome analysis. Review.
Drobná E; Bialková A; Subík J
Folia Microbiol (Praha); 2008; 53(4):275-87. PubMed ID: 18759110
[TBL] [Abstract][Full Text] [Related]
18. Lightweight genome viewer: portable software for browsing genomics data in its chromosomal context.
Faith JJ; Olson AJ; Gardner TS; Sachidanandam R
BMC Bioinformatics; 2007 Sep; 8():344. PubMed ID: 17877794
[TBL] [Abstract][Full Text] [Related]
19. Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts.
Scannell DR; Byrne KP; Gordon JL; Wong S; Wolfe KH
Nature; 2006 Mar; 440(7082):341-5. PubMed ID: 16541074
[TBL] [Abstract][Full Text] [Related]
20. Visualization of comparative genomic analyses by BLAST score ratio.
Rasko DA; Myers GS; Ravel J
BMC Bioinformatics; 2005 Jan; 6():2. PubMed ID: 15634352
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]