These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. GOBASE--a database of organelle and bacterial genome information. O'Brien EA; Zhang Y; Yang L; Wang E; Marie V; Lang BF; Burger G Nucleic Acids Res; 2006 Jan; 34(Database issue):D697-9. PubMed ID: 16381962 [TBL] [Abstract][Full Text] [Related]
3. Complete sequence of the maize chloroplast genome: gene content, hotspots of divergence and fine tuning of genetic information by transcript editing. Maier RM; Neckermann K; Igloi GL; Kössel H J Mol Biol; 1995 Sep; 251(5):614-28. PubMed ID: 7666415 [TBL] [Abstract][Full Text] [Related]
4. Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus. Raubeson LA; Peery R; Chumley TW; Dziubek C; Fourcade HM; Boore JL; Jansen RK BMC Genomics; 2007 Jun; 8():174. PubMed ID: 17573971 [TBL] [Abstract][Full Text] [Related]
6. Transcriptional Slippage and RNA Editing Increase the Diversity of Transcripts in Chloroplasts: Insight from Deep Sequencing of Vigna radiata Genome and Transcriptome. Lin CP; Ko CY; Kuo CI; Liu MS; Schafleitner R; Chen LF PLoS One; 2015; 10(6):e0129396. PubMed ID: 26076132 [TBL] [Abstract][Full Text] [Related]
7. pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Vandepoele K; Van Bel M; Richard G; Van Landeghem S; Verhelst B; Moreau H; Van de Peer Y; Grimsley N; Piganeau G Environ Microbiol; 2013 Aug; 15(8):2147-53. PubMed ID: 23826978 [TBL] [Abstract][Full Text] [Related]
8. GenColors: accelerated comparative analysis and annotation of prokaryotic genomes at various stages of completeness. Romualdi A; Siddiqui R; Glöckner G; Lehmann R; Sühnel J Bioinformatics; 2005 Sep; 21(18):3669-71. PubMed ID: 16076887 [TBL] [Abstract][Full Text] [Related]
10. The Gene Set Builder: collation, curation, and distribution of sets of genes. Yusuf D; Lim JS; Wasserman WW BMC Bioinformatics; 2005 Dec; 6():305. PubMed ID: 16371163 [TBL] [Abstract][Full Text] [Related]
11. OrgConv: detection of gene conversion using consensus sequences and its application in plant mitochondrial and chloroplast homologs. Hao W BMC Bioinformatics; 2010 Mar; 11():114. PubMed ID: 20196863 [TBL] [Abstract][Full Text] [Related]
12. cTFbase: a database for comparative genomics of transcription factors in cyanobacteria. Wu J; Zhao F; Wang S; Deng G; Wang J; Bai J; Lu J; Qu J; Bao Q BMC Genomics; 2007 Apr; 8():104. PubMed ID: 17439663 [TBL] [Abstract][Full Text] [Related]
13. Comparative genomics of four Liliales families inferred from the complete chloroplast genome sequence of Veratrum patulum O. Loes. (Melanthiaceae). Do HD; Kim JS; Kim JH Gene; 2013 Nov; 530(2):229-35. PubMed ID: 23973725 [TBL] [Abstract][Full Text] [Related]
14. ChloroMitoCU: Codon patterns across organelle genomes for functional genomics and evolutionary applications. Sablok G; Chen TW; Lee CC; Yang C; Gan RC; Wegrzyn JL; Porta NL; Nayak KC; Huang PJ; Varotto C; Tang P DNA Res; 2017 Jun; 24(3):327-332. PubMed ID: 28419256 [TBL] [Abstract][Full Text] [Related]
15. GOBASE: an organelle genome database. O'Brien EA; Zhang Y; Wang E; Marie V; Badejoko W; Lang BF; Burger G Nucleic Acids Res; 2009 Jan; 37(Database issue):D946-50. PubMed ID: 18953030 [TBL] [Abstract][Full Text] [Related]
16. Gene duplication, transfer, and evolution in the chloroplast genome. Xiong AS; Peng RH; Zhuang J; Gao F; Zhu B; Fu XY; Xue Y; Jin XF; Tian YS; Zhao W; Yao QH Biotechnol Adv; 2009; 27(4):340-7. PubMed ID: 19472510 [TBL] [Abstract][Full Text] [Related]
17. Phytome: a platform for plant comparative genomics. Hartmann S; Lu D; Phillips J; Vision TJ Nucleic Acids Res; 2006 Jan; 34(Database issue):D724-30. PubMed ID: 16381967 [TBL] [Abstract][Full Text] [Related]
18. Evolution and mechanism of translation in chloroplasts. Sugiura M; Hirose T; Sugita M Annu Rev Genet; 1998; 32():437-59. PubMed ID: 9928487 [TBL] [Abstract][Full Text] [Related]
19. The Chloroplast Function Database II: a comprehensive collection of homozygous mutants and their phenotypic/genotypic traits for nuclear-encoded chloroplast proteins. Myouga F; Akiyama K; Tomonaga Y; Kato A; Sato Y; Kobayashi M; Nagata N; Sakurai T; Shinozaki K Plant Cell Physiol; 2013 Feb; 54(2):e2. PubMed ID: 23230006 [TBL] [Abstract][Full Text] [Related]