BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

123 related articles for article (PubMed ID: 16403795)

  • 1. Short fuzzy tandem repeats in genomic sequences, identification, and possible role in regulation of gene expression.
    Boeva V; Regnier M; Papatsenko D; Makeev V
    Bioinformatics; 2006 Mar; 22(6):676-84. PubMed ID: 16403795
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Tandem repeats over the edit distance.
    Sokol D; Benson G; Tojeira J
    Bioinformatics; 2007 Jan; 23(2):e30-5. PubMed ID: 17237101
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Pattern locator: a new tool for finding local sequence patterns in genomic DNA sequences.
    Mrázek J; Xie S
    Bioinformatics; 2006 Dec; 22(24):3099-100. PubMed ID: 17095514
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A genetic algorithm for the detection of new cis-regulatory modules in sets of coregulated genes.
    Aerts S; Van Loo P; Moreau Y; De Moor B
    Bioinformatics; 2004 Aug; 20(12):1974-6. PubMed ID: 15044242
    [TBL] [Abstract][Full Text] [Related]  

  • 5. HomologMiner: looking for homologous genomic groups in whole genomes.
    Hou M; Berman P; Hsu CH; Harris RS
    Bioinformatics; 2007 Apr; 23(8):917-25. PubMed ID: 17308341
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RBR: library-less repeat detection for ESTs.
    Malde K; Schneeberger K; Coward E; Jonassen I
    Bioinformatics; 2006 Sep; 22(18):2232-6. PubMed ID: 16837527
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.
    Grad YH; Roth FP; Halfon MS; Church GM
    Bioinformatics; 2004 Nov; 20(16):2738-50. PubMed ID: 15145800
    [TBL] [Abstract][Full Text] [Related]  

  • 8. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A software program combining sequence motif searches with keywords for finding repeats containing DNA sequences.
    Bilgen M; Karaca M; Onus AN; Ince AG
    Bioinformatics; 2004 Dec; 20(18):3379-86. PubMed ID: 15256410
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.
    Favorov AV; Gelfand MS; Gerasimova AV; Ravcheev DA; Mironov AA; Makeev VJ
    Bioinformatics; 2005 May; 21(10):2240-5. PubMed ID: 15728117
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Exhaustive whole-genome tandem repeats search.
    Krishnan A; Tang F
    Bioinformatics; 2004 Nov; 20(16):2702-10. PubMed ID: 15145809
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Beyond tandem repeats: complex pattern structures and distant regions of similarity.
    Hauth AM; Joseph DA
    Bioinformatics; 2002; 18 Suppl 1():S31-7. PubMed ID: 12169528
    [TBL] [Abstract][Full Text] [Related]  

  • 13. PEAKS: identification of regulatory motifs by their position in DNA sequences.
    Bellora N; Farré D; Mar Albà M
    Bioinformatics; 2007 Jan; 23(2):243-4. PubMed ID: 17098773
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TFBScluster: a resource for the characterization of transcriptional regulatory networks.
    Donaldson IJ; Chapman M; Göttgens B
    Bioinformatics; 2005 Jul; 21(13):3058-9. PubMed ID: 15855248
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Sequence turnover and tandem repeats in cis-regulatory modules in drosophila.
    Sinha S; Siggia ED
    Mol Biol Evol; 2005 Apr; 22(4):874-85. PubMed ID: 15659554
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Parametric alignment of Drosophila genomes.
    Dewey CN; Huggins PM; Woods K; Sturmfels B; Pachter L
    PLoS Comput Biol; 2006 Jun; 2(6):e73. PubMed ID: 16789815
    [TBL] [Abstract][Full Text] [Related]  

  • 17. GATA: a graphic alignment tool for comparative sequence analysis.
    Nix DA; Eisen MB
    BMC Bioinformatics; 2005 Jan; 6():9. PubMed ID: 15655071
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RF: a method for filtering short reads with tandem repeats for genome mapping.
    Misawa K
    Genomics; 2013 Jul; 102(1):35-7. PubMed ID: 23542167
    [TBL] [Abstract][Full Text] [Related]  

  • 19. STAR: an algorithm to Search for Tandem Approximate Repeats.
    Delgrange O; Rivals E
    Bioinformatics; 2004 Nov; 20(16):2812-20. PubMed ID: 15180940
    [TBL] [Abstract][Full Text] [Related]  

  • 20. STRING: finding tandem repeats in DNA sequences.
    Parisi V; De Fonzo V; Aluffi-Pentini F
    Bioinformatics; 2003 Sep; 19(14):1733-8. PubMed ID: 14512342
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.