189 related articles for article (PubMed ID: 16430778)
1. A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks.
Conzelmann H; Saez-Rodriguez J; Sauter T; Kholodenko BN; Gilles ED
BMC Bioinformatics; 2006 Jan; 7():34. PubMed ID: 16430778
[TBL] [Abstract][Full Text] [Related]
2. Signaling through receptors and scaffolds: independent interactions reduce combinatorial complexity.
Borisov NM; Markevich NI; Hoek JB; Kholodenko BN
Biophys J; 2005 Aug; 89(2):951-66. PubMed ID: 15923229
[TBL] [Abstract][Full Text] [Related]
3. Exact model reduction of combinatorial reaction networks.
Conzelmann H; Fey D; Gilles ED
BMC Syst Biol; 2008 Aug; 2():78. PubMed ID: 18755034
[TBL] [Abstract][Full Text] [Related]
4. Trading the micro-world of combinatorial complexity for the macro-world of protein interaction domains.
Borisov NM; Markevich NI; Hoek JB; Kholodenko BN
Biosystems; 2006; 83(2-3):152-66. PubMed ID: 16242235
[TBL] [Abstract][Full Text] [Related]
5. Reduced modeling of signal transduction - a modular approach.
Koschorreck M; Conzelmann H; Ebert S; Ederer M; Gilles ED
BMC Bioinformatics; 2007 Sep; 8():336. PubMed ID: 17854494
[TBL] [Abstract][Full Text] [Related]
6. Architecture of basic building blocks in protein and domain structural interaction networks.
Moon HS; Bhak J; Lee KH; Lee D
Bioinformatics; 2005 Apr; 21(8):1479-86. PubMed ID: 15613386
[TBL] [Abstract][Full Text] [Related]
7. Functional evaluation of domain-domain interactions and human protein interaction networks.
Schlicker A; Huthmacher C; RamÃrez F; Lengauer T; Albrecht M
Bioinformatics; 2007 Apr; 23(7):859-65. PubMed ID: 17456608
[TBL] [Abstract][Full Text] [Related]
8. Combinatorial complexity and compositional drift in protein interaction networks.
Deeds EJ; Krivine J; Feret J; Danos V; Fontana W
PLoS One; 2012; 7(3):e32032. PubMed ID: 22412851
[TBL] [Abstract][Full Text] [Related]
9. Topology of small-world networks of protein-protein complex structures.
del Sol A; Fujihashi H; O'Meara P
Bioinformatics; 2005 Apr; 21(8):1311-5. PubMed ID: 15659419
[TBL] [Abstract][Full Text] [Related]
10. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
Foffi G; Pastore A; Piazza F; Temussi PA
Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
[TBL] [Abstract][Full Text] [Related]
11. Greedily building protein networks with confidence.
Bader JS
Bioinformatics; 2003 Oct; 19(15):1869-74. PubMed ID: 14555618
[TBL] [Abstract][Full Text] [Related]
12. Dynamic pathway modeling of signal transduction networks: a domain-oriented approach.
Conzelmann H; Gilles ED
Methods Mol Biol; 2008; 484():559-78. PubMed ID: 18592201
[TBL] [Abstract][Full Text] [Related]
13. A system for generating transcription regulatory networks with combinatorial control of transcription.
Roy S; Werner-Washburne M; Lane T
Bioinformatics; 2008 May; 24(10):1318-20. PubMed ID: 18400774
[TBL] [Abstract][Full Text] [Related]
14. Analytical reduction of combinatorial complexity arising from multiple protein modification sites.
Birtwistle MR
J R Soc Interface; 2015 Feb; 12(103):. PubMed ID: 25519995
[TBL] [Abstract][Full Text] [Related]
15. BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains.
Blinov ML; Faeder JR; Goldstein B; Hlavacek WS
Bioinformatics; 2004 Nov; 20(17):3289-91. PubMed ID: 15217809
[TBL] [Abstract][Full Text] [Related]
16. Modeling protein network evolution under genome duplication and domain shuffling.
Evlampiev K; Isambert H
BMC Syst Biol; 2007 Nov; 1():49. PubMed ID: 17999763
[TBL] [Abstract][Full Text] [Related]
17. Modeling of growth factor-receptor systems from molecular-level protein interaction networks to whole-body compartment models.
Wu FTH; Stefanini MO; Gabhann FM; Popel AS
Methods Enzymol; 2009; 467():461-497. PubMed ID: 19897104
[TBL] [Abstract][Full Text] [Related]
18. Exploration of the dynamic properties of protein complexes predicted from spatially constrained protein-protein interaction networks.
Yen EA; Tsay A; Waldispuhl J; Vogel J
PLoS Comput Biol; 2014 May; 10(5):e1003654. PubMed ID: 24874694
[TBL] [Abstract][Full Text] [Related]
19. ProtNet: a tool for stochastic simulations of protein interaction networks dynamics.
Bernaschi M; Castiglione F; Ferranti A; Gavrila C; Tinti M; Cesareni G
BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S4. PubMed ID: 17430571
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]