365 related articles for article (PubMed ID: 16433545)
1. Catalytic mechanism and product specificity of the histone lysine methyltransferase SET7/9: an ab initio QM/MM-FE study with multiple initial structures.
Hu P; Zhang Y
J Am Chem Soc; 2006 Feb; 128(4):1272-8. PubMed ID: 16433545
[TBL] [Abstract][Full Text] [Related]
2. A quantum mechanics/molecular mechanics study of the catalytic mechanism and product specificity of viral histone lysine methyltransferase.
Zhang X; Bruice TC
Biochemistry; 2007 Aug; 46(34):9743-51. PubMed ID: 17676763
[TBL] [Abstract][Full Text] [Related]
3. Mechanism of product specificity of AdoMet methylation catalyzed by lysine methyltransferases: transcriptional factor p53 methylation by histone lysine methyltransferase SET7/9.
Zhang X; Bruice TC
Biochemistry; 2008 Mar; 47(9):2743-8. PubMed ID: 18260647
[TBL] [Abstract][Full Text] [Related]
4. Catalytic mechanism and product specificity of rubisco large subunit methyltransferase: QM/MM and MD investigations.
Zhang X; Bruice TC
Biochemistry; 2007 May; 46(18):5505-14. PubMed ID: 17429949
[TBL] [Abstract][Full Text] [Related]
5. Histone lysine methyltransferase SET7/9: formation of a water channel precedes each methyl transfer.
Zhang X; Bruice TC
Biochemistry; 2007 Dec; 46(51):14838-44. PubMed ID: 18044969
[TBL] [Abstract][Full Text] [Related]
6. Product specificity and mechanism of protein lysine methyltransferases: insights from the histone lysine methyltransferase SET8.
Zhang X; Bruice TC
Biochemistry; 2008 Jun; 47(25):6671-7. PubMed ID: 18512960
[TBL] [Abstract][Full Text] [Related]
7. Transition state stabilization and substrate strain in enzyme catalysis: ab initio QM/MM modelling of the chorismate mutase reaction.
Ranaghan KE; Ridder L; Szefczyk B; Sokalski WA; Hermann JC; Mulholland AJ
Org Biomol Chem; 2004 Apr; 2(7):968-80. PubMed ID: 15034619
[TBL] [Abstract][Full Text] [Related]
8. Understanding product specificity of protein lysine methyltransferases from QM/MM molecular dynamics and free energy simulations: the effects of mutation on SET7/9 beyond the Tyr/Phe switch.
Yao J; Chu Y; An R; Guo H
J Chem Inf Model; 2012 Feb; 52(2):449-56. PubMed ID: 22242964
[TBL] [Abstract][Full Text] [Related]
9. Ab initio quantum mechanical/molecular mechanical molecular dynamics simulation of enzyme catalysis: the case of histone lysine methyltransferase SET7/9.
Wang S; Hu P; Zhang Y
J Phys Chem B; 2007 Apr; 111(14):3758-64. PubMed ID: 17388541
[TBL] [Abstract][Full Text] [Related]
10. Reductive half-reaction of aldehyde oxidoreductase toward acetaldehyde: Ab initio and free energy quantum mechanical/molecular mechanical calculations.
Dieterich JM; Werner HJ; Mata RA; Metz S; Thiel W
J Chem Phys; 2010 Jan; 132(3):035101. PubMed ID: 20095751
[TBL] [Abstract][Full Text] [Related]
11. Theoretical perspectives on the reaction mechanism of serine proteases: the reaction free energy profiles of the acylation process.
Ishida T; Kato S
J Am Chem Soc; 2003 Oct; 125(39):12035-48. PubMed ID: 14505425
[TBL] [Abstract][Full Text] [Related]
12. The role of the putative catalytic base in the phosphoryl transfer reaction in a protein kinase: first-principles calculations.
Valiev M; Kawai R; Adams JA; Weare JH
J Am Chem Soc; 2003 Aug; 125(33):9926-7. PubMed ID: 12914447
[TBL] [Abstract][Full Text] [Related]
13. How do SET-domain protein lysine methyltransferases achieve the methylation state specificity? Revisited by Ab initio QM/MM molecular dynamics simulations.
Hu P; Wang S; Zhang Y
J Am Chem Soc; 2008 Mar; 130(12):3806-13. PubMed ID: 18311969
[TBL] [Abstract][Full Text] [Related]
14. Quantum chemical modeling of enzymatic reactions: the case of histone lysine methyltransferase.
Georgieva P; Himo F
J Comput Chem; 2010 Jun; 31(8):1707-14. PubMed ID: 20082388
[TBL] [Abstract][Full Text] [Related]
15. Catalytic properties and kinetic mechanism of human recombinant Lys-9 histone H3 methyltransferase SUV39H1: participation of the chromodomain in enzymatic catalysis.
Chin HG; Patnaik D; Estève PO; Jacobsen SE; Pradhan S
Biochemistry; 2006 Mar; 45(10):3272-84. PubMed ID: 16519522
[TBL] [Abstract][Full Text] [Related]
16. Structural basis for the methylation site specificity of SET7/9.
Couture JF; Collazo E; Hauk G; Trievel RC
Nat Struct Mol Biol; 2006 Feb; 13(2):140-6. PubMed ID: 16415881
[TBL] [Abstract][Full Text] [Related]
17. Structure and catalytic mechanism of the human histone methyltransferase SET7/9.
Xiao B; Jing C; Wilson JR; Walker PA; Vasisht N; Kelly G; Howell S; Taylor IA; Blackburn GM; Gamblin SJ
Nature; 2003 Feb; 421(6923):652-6. PubMed ID: 12540855
[TBL] [Abstract][Full Text] [Related]
18. Reaction path potential for complex systems derived from combined ab initio quantum mechanical and molecular mechanical calculations.
Lu Z; Yang W
J Chem Phys; 2004 Jul; 121(1):89-100. PubMed ID: 15260525
[TBL] [Abstract][Full Text] [Related]
19. Theoretical modeling of enzyme catalytic power: analysis of "cratic" and electrostatic factors in catechol O-methyltransferase.
Roca M; Martí S; Andrés J; Moliner V; Tuñón I; Bertrán J; Williams IH
J Am Chem Soc; 2003 Jun; 125(25):7726-37. PubMed ID: 12812514
[TBL] [Abstract][Full Text] [Related]
20. Mechanism of histone methylation catalyzed by protein lysine methyltransferase SET7/9 and origin of product specificity.
Guo HB; Guo H
Proc Natl Acad Sci U S A; 2007 May; 104(21):8797-802. PubMed ID: 17517655
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
